Replacing an audio track without re-encoding the video

I'm new to Audition CC so apologies for the basic question. I originally asked this in the Premiere Pro forum but I think it's more an Audition question..  I have AVCHD home video (MTS video with AC3 stereo audio) and have found I can clean up the audio, for example in speeches, very well in Audition. Is there a way to just replace the MTS's orginal audio track without re-encoding the video (which it seems I have to, if I do this via Premiere Pro)? In some cases the videos are poorly lit and any re-encoding makes them look noticeably worse than the original. In any event the video does not need re-encoding, I just need to replace the audio. Maybe I need to export the cleaned-up audio from Audition and use some other program to replace the audio in the original MTS file? Is that called re-muxing?  Thanks in advance for any help.

Thanks Bob and Ryclark.
  Bob, our aim is to copy these videos onto USB sticks, for our family to watch on our various home TVs, from a media player such as WD Home TV, a media PC or a laptop via HDMI cable. I expect the original MTS files, with cleaned up audio, will be fine. Media Info shows these to be video: AVC format, variable bit rate, 16.0 max bit rate, 1920x1080 pixels, 25.000 fps, 8 bit, interlaced; audio: AC3 format, 256 Kbps bit rate, 2 channels, 48.0 KHz sampling rate, 16 bits bit depth. I'm keen to avoid re-encoding the video, and it seems I can. My initial test worked and tonight (I'm in Australia) I'll test further... I can edit the AC3 audio in Audition, export it as a new AC3 with the same format as original, then use some other non-Adobe program to replace the original audio track with the new one, without touching the video.
  Ryclark, I believe you are right. My novice-level understanding is that the process of separating the components of a video file such as my MTS file (video, audio and possibly others) into separate files is 'de-muxing' and putting them back together is re-muxing. Audition can save or export the original or edited audio track of my MTS file to a separate file so I assume that's like a specific audio de-mux. However I don't think Adobe products can re-mux without re-encoding the video (slow, larger resulting file size, worse video quality!), so I need some other program to replace my MTS file's audio with the new/edited audio.
  So far I've found the free-ware Avidemux can do it but past experience is that free-ware can be a bit flaky or over time not as bullet-proof as a good/proven commercial product, so I'll look a bit further - or does someone in this forum know of such a product? HD Video Converter seems to be an option but it looks a bit amateurish.
  By the way, if anyone is after a cut/join program to remove unwanted parts of a video without re-encoding the whole thing (ie. fast, same file size and unchanged video quality) I found Avidemux (free) only works on whole frames (GOP?) and the joins can have a little 'flick', whereas for $40-$50 a program like Fame Ring Smart Cutter for MTS videos (the Sony vidcam home video files I'm interested in) is frame accurate (it only re-encodes around the cut points) and works very well (smooth cut/join points). Smart Cutter doesn't do AVI videos (for my PC screen-recording videos) but I found SolveigMM Video Splitter Home Edition works well with those (not so well with my MTS files).

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