Storing .msg files , using them in hyperlinks

Hello ev'body!
We have a problem with .msg files stored in SharePoint 2013 online. If we access them directly from SharePoint they open up in Outlook as we expect them to. On the other hand, if we make hyperlinks to them from Excel, Office gets confused and opens them
in IE. They look like a mess.
My theory is that Office consider them 'unsafe' thus opens them in IE. Maybe we have to declear the website as safe or something similar?
After that the the file will be opened in IE even if we open them directly from the document library. I have read  many articles that suggest setting MIME types and running PowerShell scripts. But these are not valid options in an Online 2013
environment are they?
An thoughts on this?
TIA
Lars

I tried. In my case my .msg file contains 3 messages appended in RFC822 format. And i created input stream for that file and created mimemessage. But reads the first message in that file. And i can't able to delete that part for the first message. So it's again and agin reading the first message.
Is there any other solution?.
Thanks.

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