Transforming signed XML document with namespace invalidates signature

I am running into a problem signing an XML document. Well, signing the document isn't the problem, as I can sign it and then verify the signature with the public key successfully. The problem comes when I transform the document to a string. It all appears to be OK, but when I transform it back, the hash no longer verifies. After more testing, it appears that the issue is related to namespaces. When I remove namespaces from the document, the signing and transformations work just fine. Does anyone have any insight on this?
Here is how I am transforming the document to an XML string that I and back.
    try
      signSAML( doc, assertionElement );
      xmlSource = new DOMSource( doc );
      baos = new ByteArrayOutputStream();
      outputTarget = new StreamResult( baos );
      xmlString = new String( new ByteArrayInputStream( baos.toByteArray() ) );
      transformerFactory = TransformerFactory.newInstance();
      transformer = transformerFactory.newTransformer();
      transformer.transform( xmlSource, outputTarget );
      boolean verified = verify( doc );
      if ( verified )
        System.out.println( "Verified" );
      else
        System.out.println( "UNVerified" );
    catch ( Exception e )
      // TODO Auto-generated catch block
      e.printStackTrace();
    }

jtahlborn wrote:
i'm not talking about the transform, i'm talking about this line:
xmlString = new String( new ByteArrayInputStream( baos.toByteArray() ) );which is a great way to break xml data.Yes. That's not the only kind of data it's good at breaking, either.
To the OP: just have your transform output to a StringWriter in the first place. Don't muck about converting between chars and bytes unless you know the correct encoding and use it. Which you don't know it and you didn't use it.

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<?xml version="1.0" encoding="utf-8"?>
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myDoc xmldom.DOMNode;
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myElement xmldom.DOMElement;
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Everyone,
Well after lots of hours spent reading web pages and blogs, etc... I was able to re-write my procedure and get it to work with different calls.
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V_TBL_RECORD.FED_REFERENCE_NBR,
V_TBL_RECORD.FIDB_TRACKING_NBR,
V_TBL_RECORD.CHECK_NBR
END LOOP;
COMMIT;
EXCEPTION
WHEN OTHERS THEN
     RAISE;
END PARSE_STATUS_XML;
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