Best way to publish epub books

Hi there,
  A friend of mine got few books that he published using self efforts using direct contact with a printing house. The books are in PDF format and he wants my help to publish these in Amazon Kindle store and Apple iBooks store. So, I'm willing to invest in tools that would help me to do the job for him.
What's the right tool before buying. I downloaded inDesign trial version but it doesn't seem to be able to read PDF files.
Any help would be appreciated.
Cheers,
Abdul

Hello again,
  I went and checked PDF document properties. The document was created by an application called (3B2 Total Publishing). It's the application that the printing press used to creat the PDF file. Unfortunately I don't have the source document and the printing press claim they don't have any source files but used in-house applicatin to create the PDF book.
I checked fonts used in the PDF file and I found 17 fonts named T1 to T17 and all (Type 3) fonts. I'm seasoned IT engineer but no experience in publishing. So, no idea whether or not this information is usefull to find a way to publish these books in epub.
Cheers,
Abdul

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