Hold Me! Squeeze Me! STRETCH ME!?!

Greetings!
I recently downloaded two free plug-ins from Too Much Too Soon http://www.mattias.nu/plugins/ called Anamorphic Squeeze and Smart Anamorphic which presumably convert 4:3 into 16:9. When I apply either of them this is what seems to happen.
My question is: when either of these filters are applied it stretches the clip in my viewer vertically. At what point in the editting/exporting process will this turn into 16:9 and look normal? Is it only after I export it to a QT movie? If so, are there particular recommended settings for the export process that will make this work out for the best?
Thanks for any advice in this matter.
Cheers,
John

Be careful about just changing your sequence to anamorphic. FCP will only show/ apply the anamorphic setting to clips imported into the sequence after the change to anamorphic has been made. So you may need to reiimport your clips into the sequence one you change the settings. Make sure, if you are using anamorphic clips, that these are also set to anamorphic. To do this scroll to the right in the bin window (where all the clips are, I forget the official name) and find the column that says 'anamorphic'. If there is a check next to the clip in the column, FCP recognizes the clip as anamorphic. If you need to change a clip to anamorphic simply click in the anamorphic column of the clip to change it. When exporting either choose 'use current settings' or to be safe 'DV NTSC 48k Anamorphic'. One last note: after exporting if you view it in Quicktime it may not look like it is the 16:9 aspect ratio. This is often quicktime's fault, not yours. I usually will view my export in VLC and change the playback options to 16:9 (its in one of the drop down menus). Hope this helps.

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    When I output to a QuickTime movie, my FCE sequence goes from 16:9 to 4:3, with the attendant vertical stretch.
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    Thank you for your responses this morning.
    I realized this morning that I did not indicate for what purpose I am exporting in the first place. Sorry. The ultimate aim for this is web streaming on my website. Some of it may go to YouTube, but the primary content is a little over an hour, so that limits what YouTube can provide.
    I do have QuickTime Pro, although I clearly do not know how to use it to solve my mystery.
    Since the majority of the footage is from my old-school mini-DV NTSC camcorder, with only about 10% from the digital still camera in HD 720p (1280x720) movie mode, my understanding was that the best route was to shoot the mini-DV in 16:9 WideScreen mode, then use Compressor to convert the 16:9 HD footage to DV-NTSC mode. That allowed me to edit in FCE 3.5 in a 16:9 environment without any rendering of footage.
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    Importing the footage in HDV solves the issue of aspect ratio, but creates a new problem with the image strobing.
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