How to edit with non-interlaced playback - for square pixel art?

I'm working with PNG sequenced images from Flash. I'm compositing in AE and I export an QT movie in "Animation" compression, 100% quality. The exported movie is as 'clean' as a Flash swf. This becomes my source movie for Premiere CS3.
When I bring my scenes to edit in Premiere CS3 I can't figure how to set up the project so the the final out-put is non-interlaced. I want the quality of the final movies to be as clean (non-interlaced) as my source movies.
I would like to work in non-DV format since my source movies are made from square pixel art (Flash & Photoshop). This process works great in Premiere 5.1, is it possible in CS3?
I work on PC - XPpro

Jim,
Thank you for responding to my post. My question is can I edit and output in Non-DV format (non-interlaced video) with CS3?
I mentioned using Flash because I wanted it to be known I was starting with square pixel art. My final goal is to make DVD movie. I use Premiere to edit the scenes. I work in animation, some traditional hand drawn, painted in Photoshop, and some Flash generated. My end results needs to be a high resolution QT movie.
I've been using Premiere 5.1 and for years (Premiere 4 before that). I would like use Premiere CS3, but I need to export without the interlaced video. Can this be done in Premiere CS3?
[URL=http://imageshack.us][IMG]http://img155.imageshack.us/img155/2331/interlacevsnoninter lacehc8.png[/IMG][/URL]

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