How to limit file access for different users in 10.7.4 Server

We had everything working perfectly with an earlier version of Lion Server. The update to 10.7.3, or 4, seems to have opened access to all files for all users. Much to our surprise, this wide-open access started without warning.
- We have an external drive that contains all of the company's archives
- We had set access for one employee to get to the files he needs, and different access for another employee. Neither saw sharepoints outside of their access settings.
After an update, each employee can see and log in to all sharepoints. There doesn't seem to be a way to limit access for each employee now. I can set 'read' access for one employee, but it doesn't stop the other employee from accessing that sharepoint/folder.
Is there some new way to go about this? Or is something simply broken with the current release?

That is good to know. If the file share is seeing the drive and ignoring its permissions, that is why everyone can see everything. I have found, in Lion Server, that it is best to get the permissions set before turning on File Sharing. I don't know if you have the luxury of turning the file share off for a little while, but I would unshare the drive and see if the issue persists if you plug the external drive into another machine. The settings for permissions are set on the file or folder itself, so the issue should follow you to the other machine.
Again, if you can, I would unshare the drive and reshare it with the permissions that you want and turn file sharing back on. However, if you can get the drive to respect permissions rather than ignoring them, I think it will save you a lot of work.

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