Importing and removing photos in Photoshop elements 9

Hi
Im sorry, but i dont completely understand your answer, although it was a little helpful.
The first sentence you advised to make sub folders in windows program.
Im pretty sure thats what ive done. But i thought it would automatically update to PSE. You mentioned it would not. Thankyou for that part.
I have cleared/re organised my windows picture folders and organised them into sub folders but when i went into PSE the old pic files and folders were showing there - except they advised no picture or data is available.
So this confuses me as there is too much files in PSE now and i cant seem to get rid of them.
The other concern is the new photos i have loaded into windows pictures program, how do i get them into PSE. This is really hard to explain in email., so i do apologise if i dont make sense or repeat myself.
But my main concern is if PSE doesnt update why does it keep old pic folders in the program if nothing is available.
i tried to uninstall and then reinstall and start teh program all over again with my newly organised windows folders but the old stuff remianed even though i uninstalled the program ????
Thanks

If you want to Organize your photos with PSE Organizer you need to make any folder changes from within the Organizer program with the Move command, not from Windows Explorer.
PSE Organizer is only a database and it does not actually keep your photos it only keeps a pointer as to their location and a thumbnail of the photos. When you move your photos around in Windows Explorer that have previously been logged into the Organizer database the Organizer has no way to know that you made all these changes.
Uninstalling/reinstalling the program is not going to fix this as the uninstall does not delete the database catalog.
Your best option at this point if you want to use the Organizer is to create a new catalog and import your photos to the new catalog. Use File>>Catalog and select New to create the new catalog. Use File>>Get Photos and Videos>>By Searching to reload your photo pointers. Choose the appropriate location to search. It will take some time (possible a few hours) to regenerate all the thumbnail views of your photos once they are imported if you have a large number of photos. Just let it finish Generating Thumbnails before trying to use the program.
To improve program performance Go to Edit>>Preferences>Media-Analysis and un-check all options. They are a huge resource hog on new catalogs. Also check the backup\sync option and uncheck it for now. You will see a improved system once the thumbnails have completed. 
Your other concern about loading new photos into PSE Organizer depends on how and where you initially load the photos. If from a camera or a card reader PSE should detect that and you should choose to run the PSE Organizer from the dialog window that opens when connecting your camera or card reader.    

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