Indesign XML-IN workflow - Anchoring issues

Hi all,
We are using Indesign CS5.5 and CS6.
For XML-IN workflow, we have developed a in-house tool for automation.
Marginal Notes: Using Script we drag the content from the XML tree and anchor it in Margin as per layout.
The issue here: In Pagination if they release the anchor the marginal content become Non-XML and wiped out from the XML tree.
Is there is any work-around to handle these types of issues.
Please advice.
Shaji

Hello Shaji.
As far as i know there is no solution for this. I'we been struggling with it for a while now. The only "workaround" i found was to use copy-paste instead of releasing the anchor:
Select the anchored frame, copy it, paste it in place, then remove the old anchor. It should create a new Story element in the XML tree. 
It's not hard to script, if all you need is to release all anchors from the document/story, for example

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