Some words are not highlighting on my read-aloud epubs after updating IOS 6.0.1 and iBooks 3.0.1

Some words are not highlighting on my read-aloud epubs after updating IOS 6.0.1 and iBooks 3.0.1 on both my iPad 2 and iPad 3. They are working absolutely fine earlier. I even updated the latest version of iBooks 3.0.2 but nothing is working. Can anybody help?

Hi spati,
I ran into this problem as well.  Seems like something funky going on with iBooks 3.  Anyways, I had to tweak my read-aloud clip starts in the smil.  Where the word was not highlighting, I added a few milliseconds to the timing until the word started highlighting again.  Not the most ideal solution, and not sure what exactly causes it because 90% of the words were just fine, but it seemed to fix the problem.  Note prior to the problem happening, I had all my clip start timings = clip end timings for the previous word, so there were no gaps.
Regards,
Tim

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