SystemInformation doesn't display the current SP level after upgrading NW07

Hi
I have updated a fresh installation of Nw2004s SR1 with Support pack SP07 to SP12. While upgrading I followed the guide SAP NetWeaver 2004s Support Package Stack Guide SPS12
I used JSPM to apply all the support packages and it was successfully done.
Then to upgrade the kernel, I did the following steps
1.     I extracted the   SAPEXE_102-20000972.SAR ,SAPEXEDB_102-20000974.SAR , IGSEXE_8-10003070.SAR to a temp directory .
2.     Then shut down the j2ee server (all instances and all services) completely
3.     Then kept a backup of DIR_CT_RUN.
4.     Copy the newly extracted components at temp directory to DIR_CT_RUN
5.     Restarted all services and j2ee engine. It started the server successfully
The upgrade is visible in SDM and JSPM, but
When I used to see the System Information(http://host:port/sap/monitoring/SystemInfo), it is still showing me the old SP details. That is
sap.com/SAP-JEECOR 7.00 SP7
sap.com/SAP-JEE 7.00 SP7
So was the version of all components are the showing the old version
While trying to open Visual Admin, I am getting the following warning message
Warning: J2EE Engine Kernel Version is older than the version of Visual Administrator
J2EE Engine Kernel Version:SP7
Visual Administrator Version:SP12
Can any body tell me why this is happening and how to fix this issue?
Thanks
Arati

Hi Juan,
The upgrade versions are correctly shown in SDM and JSPM. That is in SDM it shows the version as SP12.
Below are the JSPM logs for those two packages specifically
#1.5 #C0000A081CD5000000000881010E3293000436C6EE390F40#1186127934984#/System/Server/Upgrade/Phases/JSPM/JSPMPhases/JSPM_MAIN##com.sap.sdt.jspm.deployment.deploy.DeploymentManager.updateItemResults(DeploymentManager.java:1667)#######Thread[main,5,main]##0#0#Info#1#com.sap.sdt.jspm.deployment.deploy.DeploymentManager.updateItemResults(DeploymentManager.java:1667)#Java###Deployment message for component : #2#SAP-JEE#Archive
vmeiPE5
sapmnt
trans
EPS
in
SAPJEE12_0-10003469.SCA has been deployed.. Software component SAP-JEE deployment messages:. #
#1.5 #C0000A081CD5000000000882010E3293000436C6EE390F40#1186127934984#/System/Server/Upgrade/Phases/JSPM/JSPMPhases/JSPM_MAIN##com.sap.sdt.jspm.deployment.deploy.DeploymentManager.updateItemResults(DeploymentManager.java:1667)#######Thread[main,5,main]##0#0#Info#1#com.sap.sdt.jspm.deployment.deploy.DeploymentManager.updateItemResults(DeploymentManager.java:1667)#Java###Deployment message for component : #2#SAP-JEECOR#Archive
vmeiPE5
sapmnt
trans
EPS
in
SAPJEECOR12_0-10003466.SCA has been deployed.. Software component SAP-JEECOR deployment messages:. #
Is there any other way to upgrade kernel (NW07 J2EE Engine),other than the steps specified by me. If so please let me know
Regards
Arati

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