Thousands of radial shadings

I am writing a plotting package, and I would like to be able to display thousands of spheres on a page. I've successfully written code to use the radial shadings with an exponential function to make really nice looking spheres. When I plot a little over 4000 of them on one page, acroread on my linux box takes several minutes to render them all, and re-renders them every time I change the zoom.
I guess my big question is:
1. Am I using the right tool for the job? Are radial shadings a good way to go, and I just have an implementation issue, or do I need to look at some other possibility, like bitmaps?
2. If I just need to change my implementation to get them to work better, where should I be looking?
2a. Is it the exponential function? Should I try a sampling function instead?
2b. In my content stream, every single sphere is inside a "q [translation and scaling matrix] cm /Sh01 sh Q" construct. Would it be faster to define a different shading for each sphere so I don't have to keep saving/resetting the graphics state?

Leonard,
Yes, I'm running 8.1.2 on OpenSUSE linux with 2.4 GHz Opteron CPUs.
For the moment, I'm gunning for a plotting package that gives static 2D views of 3D data. Attempting to write U3D files and getting them hooked into a pdf file is a possible effort when/if I can get static 2D views to my satisfaction.
Currently I plot single color circles, either with or without an outline around the edge. With an outline runs the risk of turning the plot into a sea of black if there are thousands of tiny particles in the plot. Without an outline gives no means of knowing how many particles are in a particular color blob, or which ones might be in front.
But, I note that I can plot thousands of outlined, single color circles on a page and have the page render in less than a second.
I had hoped that radial shading would be a good compromise between outlines/no outlines-- individual particles defined while the contour colors remain clear with clusters of tiny particles.
Unfortunately, waiting 5 minutes for 4000 radial shadings to render is not an option. Many of my plots will have 10 - 20 thousand particles in them. This is why I was hoping that I was doing something stupid in my implementation.
-Charles

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