BC Activation cancelled manually

Guru's,
We just connected a additional new R/3 system to existing BW 3.5 system.
All datasources are replicated in BW.
For a particular datasource of Costcenter accounting, i just double clicked and it started a background job with BC_INST*. Actually i did it by mistake. But later I cancelled this job.
Now, my problem is I would like to know is there any effect on existing Datasources from other R/3 system and also will this affect Infoobjects, Infocubes, Update rules in BW?
I just thought, Since i was not interested in Activating any BC...instead of putting load on system, i should just cancel the job. And I cancelled it.
Does "Cancelling the job" a problem?
Please advise.

Thanks for your helpful input Jr.
I've posted another question regarding BC Activation...
Can you please throw some light on this?
Hi All,
Please find my detailed problem description. Pls. help me out in finding a reason/process behind it ---
Recently we connected a new R/3 system to our BW Development.
This is the second R/3 system connected to BW. Lets call it RAT2. and the first R/3 system RAT1.
We have already active Infosource 0CO_OM_CCA_9 connected to RAT1 system.
Now I want to assign 0CO_OM_CCA_9 datasource from RAT2 to Infosource 0CO_OM_CCA_9 in BW.
Following is what I did -
1) BW System RSA1>Source Systems (RAT2 system)>Datasource Overview>Searched 0CO_OM_CCA_9 datasource>Right click "Assign Infosource"
This gave me a dialog box -
Datasource name 0CO_OM_CCA_9
Source System - RAT2 system
and Infosource Assignment
Content - 0CO_OM_CCA_9
2) I continueed on this screen and it started a background job for BC_INST_(say)JOB1
3) Later system asked me to manually select Activation of BC and I just said "Install>Install in background"
4) This also started a background job say BC_INST_JOB2 which finished in around 60secs and DS 0CO_OM_CCA_9 was assigned to infosource 0CO_OM_CCA_9 with new source system RAT2.
My concern is job BC_INST_JOB1 that started earlier was running for long time and it tried to activate irrelevant infoobjects(objects which i did not want to activate).
Now, my question is why the system started the first job BC_INST_JOB1?
We are onto BW3.5 environment.
I cancelled this first job now and it has no negative effect on my datasource assignment to Infosource.
Please guide me.

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