Data missing in datalog type files when logging on Compact field point

Hi,
I have a datalogging application running on CFP 2220 which logs data every 10sec to a *.dat file continuously for 2days. The logging method is as follows:
1. Open *.dat file connection once in the beginning of the application.
2. log data continuously to the file every 10 secs 
3. Close connection when the application is stopped.
Data fields logged to the file are : Datetime, SensorName, Sensorvalue1, Sensorvalue2, SensorErrordetail.
The problem I am facing is that, when I try to read the data in Labview (on PC) from the *.dat file then it contains valid data only for approx. 1 day and the data for other days is not logged to the file but instead there are empty fields displayed. Also when I checked the file last update datetime I could see thats its latest and updated..
Can someone please help me to figure out the possibilty of the problem.  
Thanks,
Alifiya

Matthew
I have tried doing all you mentioned a few times over the last couple of days.
I have somewhat isolated the problem. Here is what I have done. I set up a few systems and have been swapping controllers, back planes, and modules. The only difference between the setups that seems to matter is the software running on the controller. Slot 8 is not working when "FieldPoint 6.0.2 - July 2008" is installed. This is the case for both real-time 8.6 and 8.5. going back to FieldPoint 6.0.1 - January 2008 software results in slot 8 being recognized.
I am currently using the minimal install of FieldPoint 6.0.1 with Real-time upgraded to 8.6 (trying to avoid unistalling programs on computer). Hopefully I will find the mix of software that allows my application to run while still recognizing all slots.
We shall see
Thank you for your time / help.

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         at intradoc.indexer.CommonIndexerBulkLoader.loadRecordWebChange(CommonIndexerBulkLoader.java:205)
         at intradoc.indexer.IndexerBulkLoader.createBulkLoad(IndexerBulkLoader.java:309)
         at intradoc.indexer.IndexerBulkLoader.doWork(IndexerBulkLoader.java:164)
         at intradoc.indexer.Indexer.doIndexing(Indexer.java:431)
         at intradoc.indexer.Indexer.buildIndex(Indexer.java:340)
         at intradoc.server.IndexerMonitor.doIndexing(IndexerMonitor.java:1012)
         at intradoc.server.IndexerMonitor$4.run(IndexerMonitor.java:832)
    Can anybody tell me what conditions would cause this error?

    well yes:
    panel.addGLEventListener(new GLR());
    "GLR" implements "GLEventListener" and defines the required methods
    I installed the Netbeans OpenGL Pack on NetBeans 6.5 and there is a problem with that...mh :(
    Ok I also tried to create a GLPanel-Sample-Project and modify it but netbeans don't know "javax.swing.GroupLayout;" I installed the JDK as well.
    mh what can i do: try to fix my actual error or try to get GroupLayout in java.swing^^

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