Exported nested sequence does not match previews

I'm currently working on a project in which I've setup my main source video edits in to one master sequence. I have then nested this master sequence in to further sequences to be exported as highlight clips. When previewing the highlight clips within Premiere's work area and within the export tool all appears correct. Once the media file is exported however (no matter my codec choices) - the audio is correctly in sync with my edit but the video is massively out of sync. In fact what appears to be happening is that the video track is reset to the start of the parent master sequence. Now all of my nested highlight sequences export their video from the start of the master sequence. Any suggestions on how to address this would be greatly appreciated.
Many thanks

I'm not sure I fully understand the issue.  Perhaps some screen shots?

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