Exporting Sequence quality horrible

Hello, I bought some 720HD (1280x720) video shot on a bluescreen. I started a new project in PPro CS4 to create an alpha channel and to export it as an FLV for use in a Flash project. I have been playing with settings for 2 days trying to get a decent quality export but no matter what settings I choose it always looks muddy and extremely low res.  Its not even the same quality of the lower resolutions I could have bought. There has got to be someway to get  decent quality in a FLV with an alpha channel.

Well, I need either a FLV with alpha channel or MOV with alpha channel.... To accomplish either are some specific settings.
However, with both I have maxed out the bitrates, the bitrate percentages, the "quality" to "best".... For the FLV I have tried 1 pass VBR, 2 pass VBR, CBR... pretty much everything listed here:
http://help.adobe.com/en_US/PremierePro/4.0/WS81733643-B4A6-45c5-ABD7-D5A90EB388FC.html
Thanks

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