Faster than Compressor

We are looking for a faster way to encode our mpg2 for DVDSP. We currently use compressor, but I'm wondering if any new hardware, software or techniques for speeding up our encoding process. Right now a 40 minute timeline exported (self contained) to QT from FCP takes compressor about 3-4 hours. I know some people are getting much slower times and some faster times, but I'm hoping to speed this up without spending more than a $1000.

All three work stations are FCP studio 5, with the 2.5 starting its life with 4.5 studio & the 2 2.7s starting with ver 5. We use the Best 90 Minute 2 Pass 4:3, which is 6.2 avg & 7.5 high, for most encodes, use the 120 & 150 for slightly longer projects. Though the later 2 don't seem to get anywhere close to the times they are named after. (yes, we use dolby audio for more video space) We are connecting to the raid via a dual Gig Ethernet system. I know that's not apple approved, but it is fast enough for DV PTVing so it was worth saving the money over fibre & xsan.
All compression is done with this work flow. After editing, QT Reference movies are saved to the Raid (Raid 5). QT ref movies are brought into compressor, with the destination being the raid.
Don't get me started on qmaster, as it has really only worked a handful of times in 5 Months.
Since each computer only has one drive (OS), I figured it wouldn't be wise to encode to local HD. I'll try it, but I'm curious though why this should matter. It seems that if it takes only about a minute to move a 3 gig file from Desktop to raid, how would this be a obstacle.

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    Russ H wrote:
    …  You raise some great points (as usual)
    I can be a pain … with my 'fundamental' questions
    Russ H wrote:
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