How to close Automatic PO freight charges

Since there are Shipment Cost Module implemented, there are automatic PO created called  "automatic PO generation for freight charges". These POs has no GR perform. Kindly please advise on how to handle it otherwise the POs will kept always open.
Below is the flow of the whole scenario :
1. SO creation (va01) using XXXX order type with the respective sales area
2. OD creation (VL01n)
3. Shipment number creation (vt01n) and include the above OD
4. Shipment cost creation (VI01)
5. Once the above is created, each line item in the shipment cost document will auto generate a PO. Note : E.g : freight charges is a line item in the shipment document and in the scheduled background Automatic PO generation for freight charges generated.

I think you are using service PO (Item Catogery D)
By default setting in SAP , Delivery complete indicator will not occur in service PO,
Check in field selection status definition via IMG ---> Material Management ---> Purchasing ---> Purchase Order -> Define Screen Layout at Document Level)----Select Field Selection Key "PT9F"  , Select the Gr/IR control and then check the delivery completion indicator (Optional Entry).

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