InDesign CS4 (ver.6) can not package all images from afp mounted server

I'm experiencing an issue on multiple Intel Mac's running OS 10.6.8 when packaging files some of the server based art does not collect.
In some folers some of the art collects and in the same folder some other files don't.
The missing files are generally .jpg or .eps and it's a combination of these files that are not being collected.
Images are sometimes shared between users but the missing images do not appear to be open elsewhere.
The docuemtns are stored across several AFP mounted server hosted on a Windows 2004 Server running ExtremeZIP to allow AFP cpnnection.
Moving the files to different volumes on the server does not appear to resolve this issue.
Any thoughts or questions? Apologies if this isn't clear.

I just had this happen again with a new InDeslgin CS4 file, I took the missing images and relinked them to a new folder I just created on my desktop and it still does nt collect these files. So not only the server, but now my desktop, and it's not just my computer, I can reproduce on other macs in 10.6.8
I convertd the files from .EPS (from Photoshop: they're flattned) to .PDF (from Apple Preview) and relinked them, and I was not able to package either.
I did find the solution:
I checked off "Include Fonts and Links Hidden and Non-Printing Content"
even though these items were on visible layers and not on the pasteboard they were excluded before I checked it off.
Thanks for your help!

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