Plug-in stops in 1.3.1_02 (and _01a) with IE

We're having a problem with the latest versions of the plug-in. We've been using the plug-in in IE (various versions) for sometime with 1.3.0.4 and 1.3.1.1.
However, when we try 1.3.1_01a and 1.3.1_02, the plug-in stops working: our html causes the plug-in to initialize (after installing if it wasn't already there) but then it doesn't run our applet, it just stops. The icon is on the desktop and we can open it but all it shows is the startup, no errors or anything (see below).
Here's the html that we've been using successfully for over a year with 1.3.0. [Actually, we usually have the codebase point to our appserver, but I tried Sun's below as a check] I test this now by uninstalling the 1_01 JRE and then installing the _02 (or 01a) JRE, then hitting our app, which fails. If I switch back to 1_01 or 0_04, then it works fine.
<object
classid="clsid:8AD9C840-044E-11D1-B3E9-00805F499D93"
codebase="http://java.sun.com/products/plugin/1.3/jinstall-13-win32.cab#Version=1,3,1,0"
id="Desktop"
style="position:absolute; left:0; top:0; width:0; height:0; visibility:visible"
hspace="0"
vspace="0"
width="0"
height="0">
<param name="code" value="sync.client.login.AgentApplet.class">
<param name="codebase" value="/classes/">
<param name="type" value="application/x-java-applet;version=1.3">
<param name="scriptable" value="true">
<param name="mayscript" value="true">
</object>
Java(TM) Plug-in: Version 1.3.1_02
Using JRE version 1.3.1_02 Java HotSpot(TM) Client VM
User home directory = C:\WINNT\Profiles\jherbers
Proxy Configuration: no proxy
c: clear console window
f: finalize objects on finalization queue
g: garbage collect
h: display this help message
l: dump classloader list
m: print memory usage
q: hide console
s: dump system properties
t: dump thread list
x: clear classloader cache
0-5: set trace level to <n>

A little more info: the following doc describes some of the changes that we made as part of the 1_01a release (and are now part of 1_02 which doesn't seem to have its own doc). Seems a little odd to include such changes in a 1a version of a release.
There is also a FAQ for 1a. It includes the suggestion to disable the plugin for IE, enable, and restart, but that didn't seem to help.
http://java.sun.com/products/plugin/1.3.1_01a/new.html
http://java.sun.com/products/plugin/1.3.1_01a/faq.html

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