Problem in Integrating Existing Application with Portal

I have my existing application. When i tried to integrate it with portal by URLScrapper Channel, my existing applications are logging me out.
My existing applications have different user / password for logging into it. Once i try login, i am not able to log into it. I hope there is some problem in session. Can anybody tell me how can rectify it.

Guys can u explain ,how to set the cookies in the session
Bcoz i am also facing the same problem when i am integrating the portal with my application.
I am able to login to the application , but when i do some operation it logs me out of the appliation .
guys can u throw light on this issue.

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