Speedgrade Render has several issues

So I'm currently trying to render out my project through speedgrade.  At first I was planning on doing most of my coloring and then bringing the large project back into premiere for small tweaks and a final export, but it turns out speedgrade doesn't like the idea of easily giving premiere back the reins.  I figured fine, I don't need most of my edit points now that I've done color, I can render it out to a big long .mov file, import that into premiere and line it up with the audio tracks letting me do what I need.  I render a small 30 second chunk as a test so I don't have to do the full 30+ minutes to later find a mistake and I find something wrong.  The video is slow.  It is choppy and plays slowly and the audio moves at a normal speed so that by the time the dialogue comes up on the video, they have already spoken the lines 10 seconds ago.  I messed around with some frame rate options to see if I could fix it there, but this didn't seem to work at all.  At this point I'm scared to continue using Speedgrade as it seems I may have to start all over on what I have already done using Colorista or Apple Color.  I like the program, has some nice things, but it has a bunch of things that drive me nuts and this is the icing on the cake.  I need to be able to export a copy that plays in real time and lines up with its own audio.
As a heads up, the .mov file I used has the problem, so it is nothing to do with importing to Premiere.  I exported with audio with the intention of deleting the audio track.  The .mov file that is supposed to be 30 seconds lasts for a full minute and has audio that far outstrips the video.  I tried messing around with some of the presets to do an H.264 or other formats and found that for some reason my color would be lost, in addition to the time still being off.

So I think I figured out what the problem was.  Somehow the audio files inside of speedgrade are way the hell shorter than the rest of my timeline.  The audio plays at normal speed and all of my video files somehow got extended out longer than they should be.  Didn't notice before because the audio track was off the timeline in my screen and audio wasn't working in speedgrade(could only hear audio after it had been rendered out, had assumed it was  aproblem with the render).  Fixed the audio in problem in speedgrade and saw that the audio was off there, expanded the timeline view and saw it was way shorter.  Now my confusion comes from wondering how the timeline got extended.  From what I can tell you can't really extend clips except for individually(I imported my entire one hour or so timeline from premiere, so I have several hundred cuts), but this would have had to extend each and every clip just a bit to make it play slow, but not make any one clip seem like it was moving too slowly, else I would realize it was a problem with speedgrade and not a problem with insufficient hardware in my machine as I thought previously.  I assume it has to be that dastardly 'optomizing timeline' thing that popped up a couple times while I was coloring, but that seems like a stupid feature for adobe to add, ruining my timeline with no way for me to fix it.
So I'm wondering, is there a way for me to fix it?  Reduce the overall timeline back to the original length?  If not, I've heard there is a way you can export all of the grading you have done to clips as .look files and apply them in After Effects, but I don't quite know how this process works, so if anyone could fill me in on that, it would be stellar.
Thanks for any help in advance, I decided to try out Speedgrade for the first time on this project to see how I liked it.  It seems like a powerful program for doing color, but has a lot of little quirks that drive me nuts in comparison to just using after effects, or if you need it done quick and dirty, a nice 3-way color corrector in premiere.

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    I cloned the Mac HD using Carbon Copy Cloner and put the clone using Migration Assistant onto the new machine (MacBook Pro - 10.7.2). Now the MacBook Pro won't boot at all. Before this, it was working fine.
    Ok, you used Migraine Assistant to try to transfer the account from the clone drive to the MBP and it didn't work, that's ok, it can be fixed by command r booting into Lion Recovery and simply erasing and reinstalling Lion from Apple's servers. (AppleID)
    I suggest you transfer the account data manually because the clone is a copy of a failing drive/corruption, use the same name in System Preferences >Accounts, drag and drop files transfer and hold option key, click on Purchases in crapStore to redownload to the new machine, install other programs from fresh sources. Cleaner machine that way. So that shoudl fix the MBP.
    in the future, try to avoid Apple's "answers" like Migraine Assistant as much as possible, it's really not reliable in any sense in actuality.
    So I want to know how to make a clone of the Mac HD of the MacBook Air that won't have booting issues when I migrate the clone to another machine.
    You can't boot a clone of OS X from another type Mac on another type Mac, only the same exact machine model.
    In your case the Migraine Assistant didn't work, so you'll have to manually install.
    Also the fact that the Mac HD of the MBA has booting issues affects the ability to access the Boot Camp (Windows 7 partition) as now I can't even boot the new machine. (But I am asking about Boot Camp in another section.)
    Well it's possible that Windows or something messed up the GUID partition map of the Mac, why it has booting issues. Likely why Migraine Assistant didn't work.
    You'll have to set up BootCamp again on the new MBP machine, talk to Microsoft about validation on the new machine and return your Windows files, programs from fresh sources.
    Likely you got malware and it was trying to write to the boot sector of the Mac, mistaking the MBR portion of the GPT for a full Windows one. This also happens when Mac users try to install Linux on their Mac's.
    Unless you need full hardware performance, you really should look at virtualization software like VMFusion, Parallels Desktop or even VirtuaBox (might be outdated) and run Windows in a window on OS X instead. Much easier to recover from malware that way.
    It seems like a catch-22 situation. I can't fix the booting problem until I send it off to the repair center to get the computer fixed. And yet the booting problem is preventing me from making a usable clone of the Mac HD.
    Well if you make a clone, it's going to be junk any.
    What you need to do is fix the new MBP machine first then use Firewire Target Disk Mode (firewire 800/400 cable and adpater if needed) and grab a copy of your files off the sick Mac or off the sick clone.
    The drive is likely fine, it's just not booting and that could mean some sort of malware/drive/data corruption.
    You'll have to install third party software on the new fixed MacBook Pro to read the NTFS drive format of the Windows 7 bootcamp parittion when the sick MacAir is in Firewire Target Disk Mode.
    http://www.paragon-software.com/home/ntfs-mac/
    https://support.apple.com/kb/HT1661

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