Uneven Sli Temperatures

Uneven to say the least, Gpu No1 rises in temperature only slightly, perhaps 10c when under load from at rest of about 38c but Gpu No2 rises to 90c+ very rapidly and would I'm sure top 100c after a few minutes.
Screen grab of the NVidea Monitor.
     The temperatures are displayed with a 14c gradient between levels
Up untill recently was running stock cooler on No2 with what seems a very effective "Ice Chameleon" on No1 - Identical as far as I can tell to the Vantec Iceberg 5 and the Evercool Nighthawk VC F117 Vga Cooler which I now have on the No2; which made no difference to the temperature curve whatsoever.
I will try changing the cards over and then the coolers to see if I can make some sense of this if I get time tomorrow. I don't know how long Iv'e had these problems as I have only recently been taking any notice of temperatures with the new NVidea control panel and now with NTune installed also.
Thanks in advance for your superior insight.

The case is very well ventilated with two additional 90mm fans - one blowing over the graphics cards and one extracting through the hard drives.
Only other thing I can think of - Sisoft sandra told me that I need to update the video bios!? as its dated Dec 04 (5.43.02.16.00).
The temperatures seem genuine in that when starting from cold both Gpu temps are low -30 - with both stabilizing at around 38 N01 and 46 - 48 No2. Although I find it hard to believe that tiny chip can heat up what must be a cubic inch of solid copper by 50c in a couple of seconds
I'm running the latest 93.71 drivers.

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    Quote from: Vorg on 10-November-09, 15:30:58
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    Hey guys,  
    Here is a nice cheap alternative.
    Here is my story about the same issue.  I found it after looking at why my computer freezes sometimes. Not very often but enough for me to do some investigation.   I noticed my IOH temp was a whopping 117 degrees Celsius. lol.  Surprised my mobo didn't burn out by now.  I wanted to evaluate the situation with the heat sink and decided to take it off.  After taking it off I found extremely crusty purple compound on board the chipset and the heatsink.  I took me FOREVER to scrape it off. it was almost like a cement which I found odd.  After scraping and cleaning the surfaces with alcohol, I placed some silver compound on and proceeded to put it back on.  
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    dero

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    Updated information on the case.
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    Here I use 3x980 in SLI with X99S Gaming 9 AC, going soon to WC the VGAs with EK blocks.....3way is far more temperature critical than 2way spaced one.
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