Using Flex Performance Profiler for Profiling Flex  with Java Applications

Hi , I am planning to use Flex Profiler to profile my Application .
I have developed a sample Application using Flex MXML ,some ActionScript classes for Events and Cairngorm , Java , Oracle as database and Blazeds . 
Can i use Flex Performance Profiler to Profile my Application . ?? I am asking this question as i ad read the below line from Adobe site and My Application includes java Methods 
"You can use the profiler to profile ActionScript 3.0 applications " Can anybody please tell me What does this mean ?? and can i use the Flex Performnace Profiler . Please suggets me .

Thanks Karl for the prompt response .
I am making a call to a Java Method from my Action Script function , or getting data from Java Method into the ActionScript function .
So my question  is , will the Flex Profiler will be applicable in this case as it internally calls Java Methods .

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