Watch Folder doesn't work with cineform codec - help needed

My computer is a:
2x Intel Xeon Processor E5-2650 (2000 MHz, 20MB);
16x Kingston DIMM 8 GB PC3-8500 ECC Reg.;
PNY Quadro 4000 with 2048 MB GDDR5-RAM;
2x 2000 GB Western Digital RE4 (7200 UPM/S-ATA II) as a RAID I
1x 120 GB OCZ Vertex 3 SSD
1x 240 GB OCZ Vertex 3 SSD (system disk)
Tyan S7050GM4NR motherboard
Windows 7
with the actual version of media encoder cc and as codec I use cineform GoProStudioPremium-2.0.1.319
I have about 2000 files to be converted from cineform avi with 4k resolution to cineform avi with 1920x1080.
All files are pre-keyed and have rgb+alpha (4:4:4:4).
When I add the folder to the "watch folder"-list then it encodes the first few clips and then I get the error message:
the AMEEncodingErrorLog shows:
- Encoding Time: 00:00:00
03/26/2014 12:27:49 AM : Encoding Failed
A low-level exception occurred in: CineForm AVI File (Exporter)
A low-level exception occurred in: CineForm AVI File (Exporter)
Export Error
Error compiling movie.
Unknown error.
My cineform settings are:
Does anybody know how to solve the problem or any workaraound?
What I already tried is to drag and drop a "few" files, for example 50 clips manually into the ame. What then happens is that the media encoder crashes completely.
I've got a client that needs all those files converted until the end of this week, so I would be really happy if anybody could help me.
Or has anyone an idea for another encoder I could use? I also tried it with telestream episode but it does not support avi container with cinepro-codec...
VirtualDub doesn't support alpha channels, so which program could work?
Best regards,
Wolfram

Hello Nariman,
thanks for your answer
1. Exactly what version does it say you have?
Version 7.2.0.43
2. what happens if you open other types of files like .MOV or WMV and convert to Cineform?
I tested it with mov- and wmv-files:
No, same problem: [..\..\Src\LegacyTime.cpp-101]
3. what happens if you take your Cineform files and convert them to other formats like H264?
This works fine.
4. How large or small are your files?
The size of the files is between 70MB and 300MB, but 90 % of them are between 90MB and 130 MB.
5 Are these stills or movies ? How many minutes?
All items are pre-keyed movies (which I exported from after effects via media encoder to the 4k-cineform files). The length of all files is between 2 und 5 seconds.
6. Are you using 3rd party plugin to import and export Cineform?
I have got the cineform studio premium codec installed. It shows up directly in the media encoder options. So I don't use anything else than media encoder and the cineform codec

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