Why are no other applications work after uploading firefox 3.6

My firefox 3.5 software worked fine on my mac 10.4.11 OS System up until yesterday...and it permitted skype to load automatically and all mac aps to run from my dock shortcuts. Since upgrade now cannot access anything but firefox...not from actual application...cannot even open mac help which appears on dock momentarily and then disappears...?! At time of upgrade I did also get a message to upgrade my adobe flash player and did so. But after discovering my computer no longer worked properly i browsed the web and saw a message there may be a rogue virus associated with that flash software upgrade?! Today I uninstalled firefox 3.6 and replaced with firefox 3.5 in hopes that woud be the fix...and also ran uninstall from adobe for the flash player...same problem persists. I cannot figure this out! please help me know what has happened...?
== This happened ==
Every time Firefox opened
== i upgraded to firefox 3.6

You can try a direct connection and select No Proxy in the connection settings.
You can find the connection settings in "Tools > Options > Advanced : Network : Connection"
Also do a malware check with a few malware scan programs. 
You need to use all programs because each detects different malware. 
Make sure that you update each program to get the latest version of the database before doing a scan.
* http://www.malwarebytes.org/mbam.php - Malwarebytes' Anti-Malware
* http://www.superantispyware.com/ - SuperAntispyware
* http://www.safer-networking.org/en/index.html - Spybot Search & Destroy
* http://www.lavasoft.com/products/ad_aware_free.php - Ad-Aware Free
* http://www.microsoft.com/windows/products/winfamily/defender/default.mspx - Windows Defender: Home Page
See also "Spyware on Windows": http://kb.mozillazine.org/Popups_not_blocked and [[Searches are redirected to another site]]

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