EDIAssembler is missing to write segment delimiter on SE segment

We have a custom batching orchestration which batches incoming EDI transaction sets(BizTalk server 2010).
When sending out this batched message it will be assembled by the EDI Assembler on the send port. We noticed that on some of the SE segments the EDI assembler is not putting any segment delimiter and writing the next segment(ST or GE) and this is causing
issues in the down stream applications.
Example:-
SE*89*7025236ST*837*7025237*005010X223A2~
SE*87*0118GE*2*13~
Appreciate any help on this.
Let me know if any additional information is needed.

Hi John, yes it is consistent.
We are using a custom batching because of our requirement to batch dynamically and not depend on the defined batches in party.
It is a simple aggregator of the disassembled xml files based on a specific grouping criteria. After this aggregation the aggregated message passes thru the send port with EDI assembler.

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    Error Brief :
    5016: A mandatory data element is missing.
    5016: A mandatory data element is missing.
    5016: A mandatory data element is missing.
    5016: A mandatory data element is missing.
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<FileSize/> <GuidelineURL>file://ByteStream</GuidelineURL> </GuidelineFile> <DetailGuidelineInfo> <IID>4</IID> <ID>ES</ID> <Name>ENVELOPE SEGMENTS</Name> <Standard>X12</Standard> <StdVersion>SERVICE SEGMENTS</StdVersion> </DetailGuidelineInfo> </GuidelineInfo> <NodeInfo> <Links> <Link Name="InterchangeSenderQual">12</Link> <Link Name="InterchangeSenderID">8283234100 </Link> <Link Name="InterchangeReceiverQual">01</Link> <Link Name="InterchangeReceiverID">041158668 </Link> <Link Name="InterchangeControlVersion">00200</Link> <Link Name="Standard">X12</Link> </Links> <Properties> <Property Name="InterchangeAuthorizationInfoQual">00</Property> <Property Name="InterchangeAuthorizationInfo"> </Property> <Property Name="InterchangeSecurityInfoQual">00</Property> <Property Name="InterchangeSecurityInfo"> </Property> <Property Name="InterchangeSenderQual">12</Property> <Property Name="InterchangeSenderID">8283234100 </Property> <Property Name="InterchangeReceiverQual">01</Property> <Property Name="InterchangeReceiverID">041158668 </Property> <Property Name="InterchangeDate">081103</Property> <Property Name="InterchangeTime">1315</Property> <Property Name="InterchangeControlStandard_RepeatingSeparator">U</Property> <Property Name="InterchangeControlVersion">00200</Property> <Property Name="InterchangeControlNumber">000271883</Property> <Property Name="InterchangeAckRequested">0</Property> <Property Name="InterchangeUsageIndicator">P</Property> <Property Name="InterchangeComponentElementSep">0x3e</Property> <Property Name="DecimalSeparator"/> <Property Name="ElementDelimiter">0x2a</Property> <Property Name="ReleaseCharacter"/> <Property Name="RepeatingSeparator"/> <Property Name="SegmentDelimiter">0xd0xa</Property> <Property Name="SubelementDelimiter">0x3e</Property> <Property Name="InterchangeChildCount">1</Property> <Property Name="InterchangeTrailerControlNumber">000271883</Property> </Properties> </NodeInfo> <FunctionalGroup Guid="{5CB8F926-ED26-11DD-93E2-00151769BE8C}" FunctionalGroupAckCode="R" TransactionSetsIncluded="1" TransactionSetsReceived="1" TransactionSetsProcessed="1" TransactionSetsAccepted="0" RError="0" NError="0" OtherWI="0"> <DataXPointer> <StartPos>107</StartPos> <Size>732</Size> </DataXPointer> <GuidelineInfo> <GuidelineFile> <FilePath>ByteStream</FilePath> <FileName>ByteStream</FileName> <LastModified/> <FileSize/> <GuidelineURL>file://ByteStream</GuidelineURL> </GuidelineFile> <DetailGuidelineInfo> <IID>4</IID> <ID>ES</ID> <Name>ENVELOPE SEGMENTS</Name> <Standard>X12</Standard> <StdVersion>SERVICE SEGMENTS</StdVersion> </DetailGuidelineInfo> </GuidelineInfo> <NodeInfo> <Links> <Link Name="GroupSenderID">8283234100</Link> <Link Name="GroupReceiverID">9099751019</Link> <Link Name="GroupVersionNumber">004010</Link> </Links> <Properties> <Property Name="GroupID">OG</Property> <Property Name="GroupSenderID">8283234100</Property> <Property Name="GroupReceiverID">9099751019</Property> <Property Name="GroupDate">20081103</Property> <Property Name="GroupTime">1315</Property> <Property Name="GroupControlNumber">271883</Property> <Property Name="GroupAgencyCode">T</Property> <Property Name="GroupVersionNumber">004010</Property> <Property Name="GroupChildCount">1</Property> <Property Name="GroupTrailerControlNumber">271883</Property> </Properties> </NodeInfo> <Transaction Guid="{5CB8FDC2-ED26-11DD-93E2-00151769BE8C}" TransactionAckCode="R" RError="4" NError="0" OtherWI="0"> <DataXPointer> <StartPos>166</StartPos> <Size>660</Size> </DataXPointer> <GuidelineInfo> <GuidelineFile> <FilePath>ByteStream</FilePath> <FileName>ByteStream</FileName> <LastModified/> <FileSize/> <GuidelineURL>file://ByteStream</GuidelineURL> </GuidelineFile> <DetailGuidelineInfo> <IID>4</IID> <ID>875</ID> <Name>GROCERY PRODUCTS PURCHASE ORDER</Name> <GroupID>OG</GroupID> <Standard>X12</Standard> <StdVersion>V4010</StdVersion> </DetailGuidelineInfo> </GuidelineInfo> <NodeInfo> <Links> <Link Name="TransactionID">875</Link> </Links> <Properties> 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This segment&apos;s standard option is Mandatory.{br}{br}This segment was expected after:{br}{tab}Segment Count: 0{br}{tab}Character: 837</ErrorMsg> <DetailGuidelineInfo> <IID>1340</IID> <ID>ISA</ID> <Name>INTERCHANGE CONTROL HEADER</Name> <Requirement>Mandatory</Requirement> <UsrRequirement>Must Use</UsrRequirement> <Excluded>0</Excluded> <MaxUse>1</MaxUse> <Key>ISA</Key> </DetailGuidelineInfo> <ErrorObjectInfo> <Parameter Name="ErrorLevel">1</Parameter> <Parameter Name="Name">EDIExistence</Parameter> <Parameter Name="_ec_CaseID">00</Parameter> <Parameter Name="_ec_dn_guid_">{5CB8FDC2-ED26-11DD-93E2-00151769BE8C}</Parameter> <Parameter Name="_ec_index">0</Parameter> <Parameter Name="_ec_last_known_data_offset">837</Parameter> <Parameter Name="_ec_node_id_">430</Parameter> <Parameter Name="_ec_size_">0</Parameter> <Parameter Name="_ec_start_pos_">837</Parameter> <Parameter Name="ec_DataPath"/> <Parameter Name="ec_ElementCount">0</Parameter> <Parameter Name="ec_PrevDataPath"/> <Parameter Name="ec_SegmentCount">0</Parameter> <Parameter Name="ec_SubElementCount">0</Parameter> <Parameter Name="ec_error_scope">Transaction</Parameter> <Parameter Name="ec_group_code">1</Parameter> </ErrorObjectInfo> <ErrorDataInfo> <Part1/> <Part3/> <DataXPointer> <StartPos>837</StartPos> <Size>0</Size> </DataXPointer> </ErrorDataInfo> </Error> </SegmentErrors> </Segment> <Segment RError="1" NError="0" OtherWI="0"> <SummaryGuidelineInfo> <IID>1399</IID> <ID>GS</ID> <Sequence/> </SummaryGuidelineInfo> <DataInfo> <DataXPointer> <StartPos>837</StartPos> <Size>0</Size> </DataXPointer> <DataPosition>0</DataPosition> </DataInfo> <SegmentErrors> <Error ErrorCode="{266F5511-2133-45F1-8DB6-79B388F18789}" Severity="Normal" Category="Rejecting" Index="2" ID="50160000"> <ErrorBrief>5016: A mandatory data element is missing.</ErrorBrief> <ErrorMsg>Segment GS(Functional Group Header) at guideline position (N/A) is missing. 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