Executable jars are running slow for certain features

A weird problem occured one day. I started running my old jar -packed application. It took more than a minute to load the main window. Also updating file browser window is really slow when I browse from a folder to another. I also tested running other jar applications and they have similar problems. Everything works but certain task are extremely slow.
I reinstalled jre1.6.0_07 but it did not help. Then I uninstalled all jdk's and jre's and installed jdk1.6.0_07 which came with jre1.6.0_07. No result. Do you have any idea where the problem is or what I could try next?

Problem solved.
It was the mingw that I installed as full installation. Full installation came with a java compiler, which made some specific java features really slow.
Another problem was uninstalling it in a way that would have restored java as it was. I tried uninstalling mingw, manually removing mingw folder, cleared environment variables, removed and reinstalled all java etc. Finally, I just reinstalled everything beginning from OS on my computer

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