Exporting video from media encoder. Half of the video export other half goes blank/black

Hi! I'm in need of help I've been trying to export this video to media encoder for about 20days now. I'm working with premiere pro cs5.5 and after effects cs5.5-
Dynamic link, I've updated the two and everything, every time I try to export my video half willl export and I believe after effects crashes and thats when the other
half of the video goes blank/black, this happens everytime, it's very frustrating and I don't know what is causing this. it actually just started.
it also does this on cs5 as well.
I am working on windows 7 HPE-510y Hewlett-Packard computer
14gb of ram

Have you checked the output in AME? I always check that before I hit go to make sure that I haven't fouled something up and that the in and out points are what I want. I spot check all along the timeline.
I'm thinking that you have some parts of the Premiere Pro project that are shots or sequences that have been "Replaced with After Effects Composotion." If this is the case, does the blackness happen in one of these shots? If it does I'd suggest trying to render that shot in AE and replace it in the PPro Timeline. If After Effects is really crashing you'll be able to find out why.
A little more detail about your project would also help.

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