G/L manual clearing of  bank account

From sub bank account I separate transaction into payment & receipts then transfer both to cash in bank account. Next, I carry out clearing at F-03 using the FIFO basis. However, those transactions which involve the inter-company, (eg payment received on behalf / expenses paid on behalf) that has the trading partner element could not be cleared by the non inter-company transactions.
How to solve this? Kindly help me. Thank you

Check the Company Code Global Data (t-code OBY6) to see if "No forex rate diff. when clearing in LC" is checked.  Changing this setting from unchecked to checked resolved a similar issue at my company.
Regards,
Shannon

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