Rendering issue in Premiere Pro CC

I have a problem when I'm rendering my timeline. It seems when I select render sequence in to out, the render seems to get hungup towards the end of render. What I mean is that around 98% the render goes incredible slow and sometimes never finishes. If I cancel the render nothing will have been rendered. In FCP if you cancelled the render, it would have saved what you have already rendered, so if you were at 98% in the render, 98% of the timeline would be saved. It seems a little better if I select render effects in to out. What is the difference between  render sequence in to out or render effects in to out?  When I render I use the mercury playback engine gpu acceleration and the only application I have open is premiere pro CC.
Another question, does it make any difference for export if you render the sequence first and then export? Or is it just as fast to export the sequence without it being rendered? In FCP if you rendered your sequence first the export would be really fast. Somebody told me that even if you render your sequence in Premiere Pro, when you export it will have to re-render the sequence, is that true?
My specs: Mac Pro 2009
Processor  2 x 2.26 GHz Quad-Core Intel Xeon
Memory  32 GB 1066 MHz DDR3 ECC
Graphics  NVIDIA GeForce GTX 680 2048 MB
Startup disk SSD
Thanks
Harry

As to the first paragraph, have you tried rendering out software-only, with the MPE turned off? For some people, they've had hangs on renders with the MPE on. Also, make sure you've got the latest drivers for your card ... and you might want to search the forum to see if there's been similar problems with that card for others. Some cards are not as nice at playing with Adobe (even though listed as 'certified') as others.
As to render before outputting, those are actually two different steps & processes ... confusing titling of the two things causes a lot of problems methinks. "Render" on the timeline within a PrPro project creates previews the program uses in the playback monitor, NOT a final-qulaity image. Not same quality et al, according to Adobe staff. Frequently posters here complain about slow renders with lousy quality and they'd rendered the entire sequence out, then checked the box on output "render" (perhaps 'encoding' would be a better term?) to use previews thinking it would speed things up.
But it didn't speed things, it just meant their output was dumbed-down to the quality of the previews.

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