Running scripts doesn't end correct

When running many scriptlines the job run through, but it never finish. SQLDeveloper accept cancel, but the scripts operation still runs (Running Script message on message line).
Does SQLDeveloper count lines the scripts cover, or does it count a scripts from start to next ; as one line?
I've tried different sizes here, and somewhere between 2500 - 5000 lines is the critical number. This is about 500-1000 scripts.

Looks like a java problem. Log file claims "lock deadlock; thread 'SQL Worksheet Execution Thread' blocked" and the lists a lot of java issues

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    rac1 compat-libstdc++-33-3.2.3-61 passed
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