TO EVERYONE HAVING NETWORK ISSUES:  Possible Bug Identified.  Need Testers.

Please do the following and report back if it solves your issue.
sudo ifconfig en1 mtu 1400
... or if you're on Ethernet (en0), go to System Preferences / Network / Ethernet / Advanced / Ethernet and set the configuration on Manual. Set the MTU to 1400.
This isn't the most optimal value, but it's low enough to account for the issues I've tested.
What seems to be happening is that the MSS value being sent by OS X is not accounting for the additional bytes required for the TCP optimizations that were added (timestamps in particular). So servers are probably trying to send larger packets than they should back to the client (You most likely).
Message was edited by: mreckhof

It doesn't matter what you're using (Ethernet or Airport). They both default to an MTU of 1500 and therefore an MSS of 1460, which is too large for PPPoE users with timestamps enabled.
So reducing the MTU (temporarily - again, this is not a fix, it's a setting to prove that this is the issue) to 1400 now reduces the MSS to 1360 which is plenty small unless you've got a lot of tunnels in path which most people won't.
If we can confirm this is related to the problem that most people are having then we'll have a very solid case for what the bug is.

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