Trouble saving Data Modeler design 4.0EA3

Hello,
I'm having trouble saving a Data Modeler design.  I can create and import tables into a physical model; however, when i save the model (File > Data Modeler > Save) it doesn't appear to be saved correctly since the resulting .dmd file is 0 bytes.  If i close the design and reopen it, none of the tables that i created appear.
I'm using version  SQL Developer Version 4.0.0.13.30 on Windows 7.
Thanks,
Pete

i don't see any recent errors in the datamodeler.log file.  the only entries for the last 2 days are:
2013-11-12 11:04:52,116 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-12 11:15:12,672 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-12 11:26:59,517 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-12 16:54:18,313 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-13 10:44:03,694 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-13 10:49:26,093 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
2013-11-13 11:08:11,679 [AWT-EventQueue-0] INFO  DataModelerAddin - Oracle SQL Developer Data Modeler 4.0.0.825
if run sqldeveloper\sqldeveloper\bin\sqldeveloper.exe, the only message in the console is:
LOAD TIME : 205
no other messages.
I have 3 different builds of sql developer 4.x - they all have this problem.  My 3.2 build does not have this problem.  So, next, i installed the Data Modeler standalone version (4.0.0.825) and created a physical model with just one table - and i was able to save it!  The .dmd had the following content (not 0 byte):
<?xml version = '1.0' encoding = 'UTF-8'?>
<OSDM_Design class="oracle.dbtools.crest.model.design.Design" name="test_dm_only" id="986F3685-3223-BAF6-8D69-6C2C4C52718E" version="3.5">
<createdBy>HillsP01</createdBy>
<createdTime>2013-11-13 16:36:18 UTC</createdTime>
<ownerDesignName>test_dm_only</ownerDesignName>
<capitalNames>false</capitalNames>
<designId>986F3685-3223-BAF6-8D69-6C2C4C52718E</designId>
</OSDM_Design>
So, looks like the Data Modeler works, but there's a problem with my installation with the full SQL Developer product.  One thing that i noticed is that my full SQL Developer install does not have a full list of logical types.  I had to manual create a the ones that i use.  In the Data Modeler only install, all of the logical types were available out of the box.

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