Clips Won't Stay Rendered

This problem is driving me crazy - hopefully I'm being an idiot and missing something really simple.
I'm editing a fairly small clip in Premiere Pro 6.0.5. About 60 seconds of 1080p at 25fps. Just to confirm, the sequence settings do match the clips.
When I hit return to render my sequence everything seems to be working correctly. I get a green bar across my sequence, everything looks great. But then I immediately get a progress bar at the bottom right of my screen saying 'Indexing Rendered' and a seemly random string of numbers and letters. As this 'indexing rendered' bar progresses, my clips turn from green to red. Looks like I have to render again! But when I do, the same thing happens... And without the rendered clips, naturally I can't really see what I'm doing in the preview window. It stutters and stalls. Any idea what I've done?
PC settings:
Windows 8.1 - 64 bit.
Intel i5 Processor - 3.40 GHz.
8 GB RAM
2GB on the video card.
20+ GB on the scratch disk (I'm actually just using my C drive).
If I've missed any relevant info, please let me know.

This usually indicates that your clip properties do not match your sequence settings.
Please tell us what your clip & sequence properties are.  We can't help you without that information.  To do this, control-click the clip name in the FCE Browser, then select Item Properties, then tell us what it says for Vid Rate, Frame Size and Compressor.  Do the same with your sequence.

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