Need help with skipping audio after upgrading to 10.9.1.

Having read the fine print, I now know that I should not have upgraded to 10.9.1 in the middle of a project.  So, started with a brand new library/event/project and I am still getting dropped out audio.  Video image is fine. When I scrub back and replay a clip, it sometimes plays better but still skips - only in new places.
Tech info: shooting with Canon C-100 converting files through Brosoft MTS (422 HQ - Audio pcm_s161e at 48000hz) using 2010 MacBook Pro with 345gb free on internal with 8gb of RAM and 380gb on Seagate external where files are located.
Any advice would be greatly appreciate.  Oh yeah, happy new year....!

With all the updateing of stuff can you confirm which you changed.
Lastest  MAC Operating System 10.9.1
Latest FCP X 10.1
Al

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