Root.fpj dropping files & not synching files with RH GUI

(Moving this discussion from the RSC forum, since the issue seems no-RSC related.)
Projects are missing topics from one session to another, or from within a current session (single-writer-access or multiple-writer-access).
Files are being randomly dropped from the root.fpj file between one RH session and the next.
Files are not being added to the root.fpj file when re-imported through the GUI (File > Import), and must be manually added with a text editor.
Here's an example of a Robo SourceControl Diff between one project's current root.fpj and its previous version, the strikethrough indicating what was deleted (by RH, on its own). Note how it starts at the comments,/comments line of one topic, and resumes at the comments,/comments line of the final topic. (RoboHelp team, are you listening?)
<?xml version="1.0" encoding="utf-8"?>
<rhpml majorversion="3" minorversion="0">
<topics>
(dozens of topics untouched)
  <topic>
   <name>logging_options_window_redirect.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
  <topic>
   <name>sec_class_proc_redirect.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
(12 other topics)
  <topic>
   <name>trdbrokertreefrm.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
  <topic>
   <name>invclass_setup_considerations.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
  <topic>
   <name>commission_defaults_window.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
</topics>
<folders>
  <folder>
   <name>!Language!</name>
  </folder>
</folders>
<topics>
  <topic>
   <name>generictemplates.htm</name>
   <comments></comments>
   <frameset>0</frameset>
  </topic>
</topics>
</rhpml>
We've had IT disable the Kaspersky anti-virus product for the RH project folders on our machines, and we'll monitor the situation. Now that we've identified a global problem, we'll all be externally storing a backup "good" copy of the root.fpj file.
Leon

This workflow might help to minimise the issue in a source control environment - it's no solution, but a partial work around for us.
When multiple authors access a project in our organisation, it's normally sequentially (that is, not working on the project at the same time).
When an author starts work, they check who last worked on the project. If it wasn't themselves, they delete the cpd file before opening the project. During this process, sometimes we get a message saying some files need to be writable, even though we aren't checking out anything at this stage. Saying No at this point prevents the fpj file being blanked out. (For us, this file isn't the root.fpj, but one in a sub-folder and I haven't been able to work out what causes this folder to misbehave.)
I've always found the cpd causes problems when multiple users are adding or removing files, so we make it a habit to delete the cpd for any project that might have multiple authors.
The blanking of the fpj file only occurs for one project as far as I'm aware.
hope this helps.

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