Round trip workflow with proxies between Premiere and AE / a more general question about how these programs work?

Hi all,
I'm new to editing with proxies in Premiere and have some questions about how to handle the relationship with After Effects. Say I have a rough cut (with proxies) and I want to send it to AE to do some effects. The simplest thing to do seems to be to replace the proxies with the originals in Premiere, send the project to AE and do my thing. But if I then want to send the project back to Premiere, it will involve the original files, which are too machine-intensive for me to edit. In theory, it seems like there should be a way to send the project with original footage to AE, do effects, send it back to Premiere, and then replace it with proxies to do further editing while retaining the effects.
This leads to a confusion about how AE works. When I do an effect, am I correct in assuming that it does nothing to the original file? If that's the case, it seems like it shouldn't matter (in the editing stage) what file AE "applies" an effect to (proxy or original). But I feel like there's a hitch in this workflow. The same question could also be asked about going back and forth in Speed Grade.
Perhaps there is no real answer to this and the best option is to save effects and grading for after I have picture lock, but sometimes that's not entirely possible or convenient, etc.
Hopefully this makes some sense—It's a little hard to explain.
Thanks.

Hi Mark,
Here are the specific sections of the manual that should give you the best explanation regarding the Check out/in workflow for FCP projects in Final Cut Server:
Check out:
http://documentation.apple.com/en/finalcutserver/usermanual/#chapter=7%26section =5
Editing:
http://documentation.apple.com/en/finalcutserver/usermanual/#chapter=7%26section =6
Check in:
http://documentation.apple.com/en/finalcutserver/usermanual/#chapter=7%26section =7
-Daniel

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Frank

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