System upgrade fails with pacman - phc-intel requires kernel26 2.6.31

Hello,
I'm a relative newbie to archlinux, so I hope I'm not asking a too stupid question ...
I have installed arch on an IBM Thinkpad X40. Was now on extended holidays and haven't done a system upgrade for a while. Wanted to do this now and pacman -Syy works fine. However, when I then start the upgrade with pacman -Su, the following error message occurs:
:: Starte komplette Systemaktualisierung...
:: portmap durch core/rpcbind ersetzen? [J/n] J
Löse Abhängigkeiten auf...
Suche nach Zwischen-Konflikten...
Fehler: Konnte den Vorgang (Kann Abhängigkeiten nicht erfüllen) nicht vorbereiten
:: phc-intel: benötigt kernel26<2.6.31
translated into English it basically means that pacman wants to replace portmap with rpcbind. However, the following error message occurs whether or not I say yes. The error messages says that it cannot fulfill the dependencies as phc-intel requires kernel26<2.6.31. The strange thing is that my kernel at the moment is 2.6.29.
A first run of pacman -u worked fine but only upgraded pacman itself. I had a pacman.conf.pacnew in /etc which I renamed to pacman.conf and kept the old one as a backup. However, this also didn't change anything.
I hope you guys can help me out, thanks in advance,
F.

The update will be trying to install a new kernel, which is why you're getting the error. For packages in the repos, a new one would be built that's compatible with the new kernel. Since it looks like phc-intel is from the AUR you'll need to build a new version yourself.
Edit - that's what I get for stepping away for a bit, you already got a response and fixed it
Last edited by mcmillan (2009-12-05 19:14:24)

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    squashfs-tools-4.2-2 sshfs-2.4-1 startup-notification-0.12-3
    sylpheed-3.1.4-1 sysfsutils-2.1.0-8 syslog-ng-3.3.5-1
    systemd-tools-184-2 sysvinit-2.88-3 talloc-2.0.7-1 tar-1.26-2
    tcl-8.5.11-1 tdb-1.2.9-2 testdisk-6.13-2 texinfo-4.13a-7
    tint2-svn-646-1 totem-plparser-3.4.2-1 transset-df-6-3
    tree-1.6.0-2 tsocks-1.8beta5-5 ttf-bitstream-vera-1.10-8
    ttf-cheapskate-2.0-8 ttf-dejavu-2.33-3 ttf-liberation-1.07.2-1
    tzdata-2012c-1 udev-166-2 [removal] udisks-1.0.4-4
    unrar-4.2.3-1 unzip-6.0-6 upower-0.9.16-1 usbmuxd-1.0.7-3
    usbutils-005-2 util-linux-2.21.2-1 v4l-utils-0.8.8-1
    vi-1:050325-2 videoproto-2.3.1-2 volumeicon-0.4.6-4
    vorbis-tools-1.4.0-3 w3m-0.5.3-3 wget-1.13.4-1 which-2.20-5
    wicd-gtk-1.7.2.4-3 wireless_tools-29-6 wpa_supplicant-0.7.3-5
    wv-1.2.9-1 x264-20120204-1 xcb-proto-1.7.1-1 xcb-util-0.3.9-1
    xchat-2.8.8-10 xcompmgr-1.1.6-1 xdg-utils-1.1.0-2.20120520
    xextproto-7.2.1-1 xf86-input-acecad-1.5.0-3
    xf86-input-aiptek-1.4.1-3 xf86-input-evdev-2.7.0-2
    xf86-input-joystick-1.6.1-1 xf86-input-keyboard-1.6.1-2
    xf86-input-mouse-1.7.2-1 xf86-input-synaptics-1.6.1-1
    xf86-input-wacom-0.15.0-1 xf86-video-apm-1.2.4-1
    xf86-video-ark-0.7.4-1 xf86-video-ast-0.93.10-1
    xf86-video-ati-6.14.99-1.20120517 xf86-video-chips-1.2.4-4
    xf86-video-cirrus-1.4.0-1 xf86-video-fbdev-0.4.2-6
    xf86-video-geode-2.11.13-1 xf86-video-glint-1.2.7-1
    xf86-video-i128-1.3.5-1 xf86-video-i740-1.3.3-1
    xf86-video-intel-2.19.0-3 xf86-video-mach64-6.9.1-1
    xf86-video-mga-1.5.0-1 xf86-video-neomagic-1.2.6-1
    xf86-video-nouveau-0.0.16_git20120512-2 xf86-video-r128-6.8.2-1
    xf86-video-rendition-4.2.4-6 xf86-video-s3-0.6.4-1
    xf86-video-s3virge-1.10.5-1 xf86-video-savage-2.3.4-1
    xf86-video-siliconmotion-1.7.6-1 xf86-video-sis-0.10.4-1
    xf86-video-tdfx-1.4.4-1 xf86-video-trident-1.3.5-1
    xf86-video-tseng-1.2.4-6 xf86-video-unichrome-0.2.7-7
    xf86-video-vesa-2.3.1-1 xf86-video-voodoo-1.2.4-6
    xf86dgaproto-2.1-2 xf86vidmodeproto-2.3.1-2 xfsprogs-3.1.8-2
    xineramaproto-1.2.1-2 xkeyboard-config-2.6-1
    xorg-bdftopcf-1.0.3-2 xorg-font-util-1.3.0-1
    xorg-font-utils-7.6-3 xorg-fonts-alias-1.0.2-2
    xorg-fonts-encodings-1.0.4-3 xorg-fonts-misc-1.0.1-2
    xorg-iceauth-1.0.5-1 xorg-mkfontdir-1.0.7-1
    xorg-mkfontscale-1.1.0-1 xorg-server-1.12.2-1
    xorg-server-common-1.12.2-1 xorg-server-utils-7.6-3
    xorg-sessreg-1.0.7-1 xorg-setxkbmap-1.3.0-1 xorg-utils-7.6-8
    xorg-xauth-1.0.7-1 xorg-xbacklight-1.1.2-3
    xorg-xcalc-1.0.4.1-2 xorg-xcmsdb-1.0.4-1
    xorg-xcursorgen-1.0.5-1 xorg-xdpyinfo-1.3.0-1
    xorg-xdriinfo-1.0.4-3 xorg-xev-1.2.0-1 xorg-xgamma-1.0.5-1
    xorg-xhost-1.0.5-1 xorg-xinit-1.3.2-1 xorg-xinput-1.6.0-1
    xorg-xkbcomp-1.2.4-1 xorg-xkill-1.0.3-3 xorg-xlsatoms-1.1.1-1
    xorg-xlsclients-1.1.2-2 xorg-xmodmap-1.0.7-1
    xorg-xprop-1.2.1-1 xorg-xrandr-1.3.5-1 xorg-xrdb-1.0.9-2
    xorg-xrefresh-1.0.4-3 xorg-xset-1.2.2-1 xorg-xsetroot-1.1.0-3
    xorg-xvinfo-1.1.1-3 xorg-xwininfo-1.1.2-1 xproto-7.0.23-1
    xvidcore-1.3.2-1 xz-5.0.3-2 youtube-dl-2012.02.27-1
    zlib-1.2.7-1
    Total Installed Size: 1941.42 MiB
    Net Upgrade Size: 358.19 MiB
    Proceed with installation? [Y/n] y
    (612/612) checking package integrity [----------------------] 100%
    (612/612) loading package files [----------------------] 100%
    (612/612) checking for file conflicts [----------------------] 100%
    error: failed to commit transaction (conflicting files)
    krb5: /etc/krb5.conf exists in filesystem
    krb5: /usr/bin/kdestroy exists in filesystem
    krb5: /usr/bin/kinit exists in filesystem
    krb5: /usr/bin/klist exists in filesystem
    krb5: /usr/bin/kpasswd exists in filesystem
    krb5: /usr/bin/krb5-config exists in filesystem
    krb5: /usr/bin/ksu exists in filesystem
    krb5: /usr/bin/kswitch exists in filesystem
    krb5: /usr/include/gssapi.h exists in filesystem
    krb5: /usr/include/gssapi/gssapi.h exists in filesystem
    krb5: /usr/include/gssapi/gssapi_krb5.h exists in filesystem
    krb5: /usr/include/kadm5/admin.h exists in filesystem
    krb5: /usr/include/krb5.h exists in filesystem
    krb5: /usr/include/krb5/locate_plugin.h exists in filesystem
    krb5: /usr/lib/libkadm5clnt.so exists in filesystem
    krb5: /usr/lib/libkadm5srv.so exists in filesystem
    krb5: /usr/lib/libkrb5.so exists in filesystem
    krb5: /usr/sbin/kadmind exists in filesystem
    krb5: /usr/share/man/man1/kdestroy.1.gz exists in filesystem
    krb5: /usr/share/man/man1/kinit.1.gz exists in filesystem
    krb5: /usr/share/man/man1/klist.1.gz exists in filesystem
    krb5: /usr/share/man/man1/kpasswd.1.gz exists in filesystem
    krb5: /usr/share/man/man1/krb5-config.1.gz exists in filesystem
    krb5: /usr/share/man/man1/ksu.1.gz exists in filesystem
    krb5: /usr/share/man/man1/kswitch.1.gz exists in filesystem
    krb5: /usr/share/man/man5/krb5.conf.5.gz exists in filesystem
    krb5: /usr/share/man/man8/kadmind.8.gz exists in filesystem
    Errors occurred, no packages were upgraded.
    [root@Vaidotas-LPCM /]#
    There are quite a lot or replaces needed, but maybe it is okay.
    Main problem is that there is some krb5 errors, which prevent from upgrading
    Last edited by vaidotas203 (2012-06-03 15:01:23)

    https://wiki.archlinux.org/index.php/Pa … stem.22.21
    As it's a while since you updated read the news items as well.

  • [solved] System upgrade fails - catalyst-libgl related

    I've been having trouble upgrading my system over the last few days.  This is what I get:
    sudo powerpill -f -Syyu
    :: Synchronising package databases...
    catalyst 1.5K 1163.9K/s 00:00:00 [------------------------------------------------------------------------------------------] 100%
    core 35.5K 135.3K/s 00:00:00 [------------------------------------------------------------------------------------------] 100%
    extra 451.3K 122.7K/s 00:00:04 [------------------------------------------------------------------------------------------] 100%
    community 375.4K 123.0K/s 00:00:03 [------------------------------------------------------------------------------------------] 100%
    :: Starting full system upgrade...
    :: Replace kernel26-firmware with core/linux-firmware? [Y/n] y
    resolving dependencies...
    looking for inter-conflicts...
    :: xf86-input-acecad conflicts with xorg-server. Remove xorg-server? [Y/n] y
    :: libgl conflicts with catalyst. Remove catalyst? [Y/n] y
    error: failed to prepare transaction (could not satisfy dependencies)
    :: lib32-catalyst-utils: requires catalyst>=10.5
    If I try to remove lib32-catalyst-utils to do the upgrade, I get:
    powerpill -R catalyst lib32-catalyst-utils
    Password:
    checking dependencies...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: bin32-google-earth: requires lib32-libgl
    :: lib32-mesa: requires lib32-libgl
    :: mesa: requires libgl
    :: mplayer: requires libgl
    :: qt: requires libgl
    :: stellarium: requires libgl
    :: wxgtk: requires libgl
    :: xorg-server: requires libgl
    :: xorg-utils: requires libgl
    Any thoughts?
    Last edited by Henry Flower (2010-06-22 21:13:15)

    Hmm. One problem solved, one to go.  I'd missed the moving of the catalyst repo to the new address; updating the repo got me to
    The following packages will be downloaded:
    [catalyst]
    catalyst-10.6-2 [16.10 MiB]
    lib32-catalyst-utils-10.6-1 [7.13 MiB]
    [extra]
    boost-1.43.0-1 [6.97 MiB]
    boost-libs-1.43.0-1 [2.23 MiB]
    xorg-server-1.8.1.902-1 [1.82 MiB]
    :: Number of Packages: 5
    :: Total Download Size: 34.24 MiB
    :: Total Installed Size: 243.51 MiB
    :: Proceed with download? [Y/n] y
    Unfortunately, then
    :: Starting full system upgrade...
    :: Replace kernel26-firmware with core/linux-firmware? [Y/n] y
    resolving dependencies...
    warning: dependency cycle detected:
    warning: xorg-server will be installed before its catalyst dependency
    looking for inter-conflicts...
    warning: removing 'libgl' from target list because it conflicts with 'catalyst'
    error: failed to prepare transaction (could not satisfy dependencies)
    :: intel-dri: requires libgl=7.8.2
    :: mach64-dri: requires libgl=7.8.2
    :: mga-dri: requires libgl=7.8.2
    :: r128-dri: requires libgl=7.8.2
    :: savage-dri: requires libgl=7.8.2
    :: sis-dri: requires libgl=7.8.2
    :: tdfx-dri: requires libgl=7.8.2
    I came across a similar problem with nvidia rather than catalyst: http://bbs.archlinux.org/viewtopic.php?id=99307 , but I don't know how to apply the solution there ('Uninstall the graphics drivers that you do not need') - are there any here that I don't need?
    Last edited by Henry Flower (2010-06-22 20:25:43)

  • [Solved] Full system upgrade fails because of Nvidia dependencies

    Problem:
    # pacman -Syu
    :: Synchronizing package databases...
    core is up to date
    extra is up to date
    community is up to date
    :: Starting full system upgrade...
    resolving dependencies...
    looking for conflicting packages...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: nvidia-dkms: requires nvidia-utils=346.35
    Things I have tried:
    $ makepkg -s
    ==> Making package: nvidia-dkms 346.47-1 (Sun Mar 1 11:42:11 PST 2015)
    ==> Checking runtime dependencies...
    ==> Installing missing dependencies...
    [sudo] password for digger:
    resolving dependencies...
    looking for conflicting packages...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: nvidia-dkms: requires nvidia-utils=346.35
    ==> ERROR: 'pacman' failed to install missing dependencies.
    # pacman -R nvidia-utils
    checking dependencies...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: nvidia-dkms: requires nvidia-utils=346.35
    :: nvidia-libgl: requires nvidia-utils
    Some info:
    $ uname -a
    Linux <hostname> 3.18.6-1-ARCH #1 SMP PREEMPT Sat Feb 7 08:44:05 CET 2015 x86_64 GNU/Linux
    # dkms status
    nvidia, 346.35, 3.18.5-1-ARCH, x86_64: installed
    nvidia, 346.35, 3.18.6-1-ARCH, x86_64: installed
    $ lspci -k | grep -A 2 -i "VGA"
    03:00.0 VGA compatible controller: NVIDIA Corporation GK107 [GeForce GT 640] (rev a1)
    Subsystem: eVga.com. Corp. Device 2643
    Kernel driver in use: nvidia
    Kernel modules: nouveau, nvidia
    Subsystem: eVga.com. Corp. Device 2643
    Kernel driver in use: snd_hda_intel
    Kernel modules: snd_hda_intel
    # pacman -Ss nvidia | grep installed
    extra/libvdpau 0.9-1 [installed]
    extra/nvidia-libgl 346.47-2 [installed: 346.35-2]
    extra/nvidia-utils 346.47-2 [installed: 346.35-2]
    # cat /etc/mkinitcpio.conf | grep ^HOOKS
    HOOKS="base udev autodetect modconf block lvm2 nvidia filesystems keyboard fsck"
    # systemctl status dkms
    ● dkms.service - Dynamic Kernel Modules System
    Loaded: loaded (/usr/lib/systemd/system/dkms.service; enabled; vendor preset: disabled)
    Active: active (exited) since Sun 2015-03-01 11:40:15 PST; 1h 43min ago
    Process: 6196 ExecStart=/usr/lib/systemd/scripts/dkms start (code=exited, status=0/SUCCESS)
    Main PID: 6196 (code=exited, status=0/SUCCESS)
    CGroup: /system.slice/dkms.service
    # pacman -Qm | grep nvidia
    nvidia-dkms 346.35-2
    nvidia-hook 2.2-3
    Let me know if any other information is needed.
    Thanks.
    Last edited by digger (2015-03-03 03:12:52)

    The fix, thanks to Xabre
    # pacman -R nvidia-dkms
    checking dependencies...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: nvidia-hook: requires nvidia-dkms
    # pacman -Rs nvidia-dkms
    checking dependencies...
    error: failed to prepare transaction (could not satisfy dependencies)
    :: nvidia-hook: requires nvidia-dkms
    [root@big-kahuna ~]# pacman -Rdd nvidia-dkms
    Packages (1) nvidia-dkms-346.35-2
    Total Removed Size: 12.29 MiB
    :: Do you want to remove these packages? [Y/n] Y
    -------- Uninstall Beginning --------
    Module: nvidia
    Version: 346.35
    Kernel: 3.18.5-1-ARCH (x86_64)
    Status: Before uninstall, this module version was ACTIVE on this kernel.
    nvidia.ko:
    - Uninstallation
    - Deleting from: /usr/lib/modules/3.18.5-1-ARCH/kernel/drivers/video/
    - Original module
    - No original module was found for this module on this kernel.
    - Use the dkms install command to reinstall any previous module version.
    nvidia-uvm.ko:
    - Uninstallation
    - Deleting from: /usr/lib/modules/3.18.5-1-ARCH/kernel/drivers/video/
    - Original module
    - No original module was found for this module on this kernel.
    - Use the dkms install command to reinstall any previous module version.
    depmod....
    DKMS: uninstall completed.
    -------- Uninstall Beginning --------
    Module: nvidia
    Version: 346.35
    Kernel: 3.18.6-1-ARCH (x86_64)
    Status: Before uninstall, this module version was ACTIVE on this kernel.
    nvidia.ko:
    - Uninstallation
    - Deleting from: /usr/lib/modules/3.18.6-1-ARCH/kernel/drivers/video/
    - Original module
    - No original module was found for this module on this kernel.
    - Use the dkms install command to reinstall any previous module version.
    nvidia-uvm.ko:
    - Uninstallation
    - Deleting from: /usr/lib/modules/3.18.6-1-ARCH/kernel/drivers/video/
    - Original module
    - No original module was found for this module on this kernel.
    - Use the dkms install command to reinstall any previous module version.
    depmod.....
    DKMS: uninstall completed.
    Deleting module version: 346.35
    completely from the DKMS tree.
    Done.
    (1/1) removing nvidia-dkms [######################] 100%
    # pacman -Syu ### This ran as expected.
    All I wanted was to have the simplest use of the Nvidia proprietary driver.  So I followed https://wiki.archlinux.org/index.php/NV … any_kernel
    So what I gather from the discussion here is that this (nvidia-dkms) should only be used for custom kernels?  And the topic should be a sub topic of https://wiki.archlinux.org/index.php/NV … tom_kernel?  Is that right?
    Thanks for you help.
    Last edited by digger (2015-03-03 03:11:58)

  • OS 10.7 system upgrade failed can't redownload it

    I am helping a friend with a MacBook Pro. She has 10.7.4 installed, and I told her how to do the five upgrades suggested by the updater. I was with her when we started the download, and then I left. She contacted me later and said that she had a screen telling her that the upgrades had failed and that she should download them again. However, if one goes to the system upgrade system prefs panel and clicks upgrade, nothing happens. When the button for manually checking updates, nothing happens. When I changed the frequency of checking for upgrades from one week to one day, nothing happens the next day
    When I go to the "About this Mac" menu item and click on the Software Update button, I get a window that tells me that there are 5 upgrades available for the computer, but clicking on the box there to get those upgrades does nothing.
    She wants to get on the cloud with her new iPad mini and this computer, but she can't because she can't upgrade email. She can't upgrade iTunes to 11, as required by her iPad mini (she has a much older version of iTunes because she never used it before) because it requires a new version of 10.7.
    Any ideas about how to get the computer to respond to the request for upgrades.
    I read in other forum responses to upgrade problems that one can go to the manual upgrade page, but I couldn't find what she needed via the links provided.
    If a new system install is required, her current system is an upgrade purchased through the Apple Store. How hard is it going to be to do a clean install via the net?
    Sadly she has never used Time Machine.
    I don't have the specifics of her machine, but it is a 2 1/2 to 3 year old MacBook Pro

    She can download the standalone updaters at support.apple.com/downloads/.

  • Solaris 10 upgrade fails with "mount failed"

    I'm trying to upgrade an aged Ultra 80 to Solaris 10u9 (from Solaris 10u2 or so), so that it can be used for our product testing purposes. After several unsuccessful attempts, I finally freed up enough space on the / filesystem (5.2GB free) by moving /opt to a newly installed second drive.
    However, the upgrade now fails with
    "Mount failed for either root, swap, or other file system.
    Pfinstall failed. Exit stat= java.lang.UNIXProcess@e2892b 2"
    At the end of the log file it says
    "Checking c0t0d0s0 for an upgradeable Solaris image.
    ERROR: Mount failed for either root, swap, or other file system."
    I'm stumped. It doesn't say which file system it's having problems with.
    Any ideas as to how to troubleshoot this problem, or what the cause might be? At 30 minutes per upgrade attempt, I'd like to know what the cause is rather than pursuing trial and error.
    Thanks.

    Look at your "vfstab" and see if there are any mounts that need a specific driver like a SAN-provided LUN. Comment them out during the upgrade for the upgrade tries to mount everything in your /etc/vfstab and if it doesn't have the driver/software to do it, it will fail...

  • [SOLVED]linux-headers upgrade fails with PGP signature error

    Whe trying to upgrade the linux kernel using:
    pacman -S linux linux-headers
    it fails with the following error:
    (2/2) checking package integrity                             [#################################] 100%
    error: linux: signature from "Tobias Powalowski <[email protected]>" is unknown trust
    error: linux-headers: signature from "Tobias Powalowski <[email protected]>" is invalid
    error: failed to commit transaction (invalid or corrupted package (PGP signature))
    Errors occurred, no packages were upgraded.
    I have tried deleting /etc/pacman.d/gnupg and the recreating it with
    pacman-key --init
    , I have also run
    pacman -Syy
    to make sure the repository is up to date.  I read the wiki post about time, but my ntp daemon is running, and I have confirmed that my time is exactly right.
    Last edited by MikeDacre (2013-04-01 23:32:27)

    Hi,
    Sorry, but that doesn't help me.  I can't find any reference in that post to this problem.  I get a similar issue when I try to upgrade mysql:
    >> sudo pacman -S mariadb libmariadbclient mariadb-clients 16:06 Mon 04-01-2013
    resolving dependencies...
    looking for inter-conflicts...
    :: libmariadbclient and libmysqlclient are in conflict. Remove libmysqlclient? [y/N] y
    :: mariadb-clients and mysql-clients are in conflict. Remove mysql-clients? [y/N] y
    :: mariadb and mysql are in conflict. Remove mysql? [y/N] y
    Targets (6): libmysqlclient-5.5.30-6 [removal] mysql-5.5.30-6 [removal]
    mysql-clients-5.5.30-6 [removal] libmariadbclient-5.5.30-2 mariadb-5.5.30-2
    mariadb-clients-5.5.30-2
    Total Download Size: 16.85 MiB
    Total Installed Size: 152.41 MiB
    Net Upgrade Size: 28.51 MiB
    Proceed with installation? [Y/n] y
    :: Retrieving packages from extra...
    libmariadbclient-5.5.30-2-x86_64 6.6 MiB 1479K/s 00:05 [#################################] 100%
    mariadb-clients-5.5.30-2-x86_64 871.8 KiB 421K/s 00:02 [#################################] 100%
    mariadb-5.5.30-2-x86_64 9.4 MiB 440K/s 00:22 [#################################] 100%
    (3/3) checking package integrity [#################################] 100%
    error: libmariadbclient: key "BBE43771487328A9" is unknown
    :: Import PGP key , "Bartlomiej Piotrowski <[email protected]>", created 2011-10-10? [Y/n] y
    error: key "Bartlomiej Piotrowski <[email protected]>" could not be imported
    error: mariadb-clients: key "BBE43771487328A9" is unknown
    :: Import PGP key 487328A9, "Bartlomiej Piotrowski <[email protected]>", created 2011-10-10? [Y/n] y
    (3/3) checking package integrity [#################################] 100%
    error: libmariadbclient: signature from "Bartlomiej Piotrowski <[email protected]>" is unknown trust
    error: mariadb-clients: signature from "Bartlomiej Piotrowski <[email protected]>" is unknown trust
    error: mariadb: signature from "Bartlomiej Piotrowski <[email protected]>" is unknown trust
    error: failed to commit transaction (invalid or corrupted package (PGP signature))
    Errors occurred, no packages were upgraded.

  • ISE upgrade failing with "% Manifest file not found in the bundle"

    Hello
    I am trying to upgrade a brand new ISE 3395 from 1.0.3.337 to 1.0.4 (latest).  It keeps failing with
    % Manifest file not found in the bundle
    Here is the output:
    company-ise-01/admin# application upgrade ise-appbundle-1.0.4.573.i386.tar.gpg ftp
    Save the current ADE-OS running configuration? (yes/no) [yes] ?
    Generating configuration...
    Saved the ADE-OS running configuration to startup successfully
    Initiating Application Upgrade...
    % Manifest file not found in the bundle
    fusd-ise-01/admin# sh application version ise
    Cisco Identity Services Engine
    Version      : 1.0.3.377
    Build Date   : Fri May  6 19:30:37 2011
    Install Date : Wed Oct 12 22:18:26 2011
    I can't find anything about this for ISE, although there are a lot of topics for the same error for ACS.  Thanks in advance.
    Saro

    Same problem with 1.1.2 and 1.1.1 patch 5:
    ISEcdemo/admin# sh ver
    Cisco Application Deployment Engine OS Release: 2.0
    ADE-OS Build Version: 2.0.4.018
    ADE-OS System Architecture: i386
    Copyright (c) 2005-2011 by Cisco Systems, Inc.
    All rights reserved.
    Hostname: ISEcdemo
    Version information of installed applications
    Cisco Identity Services Engine
    Version      : 1.1.1.268
    Build Date   : Mon Jun 25 05:49:23 2012
    Install Date : Wed Sep 12 09:12:53 2012
    Cisco Identity Services Engine Patch
    Version      : 1
    Install Date : Wed Sep 12 10:01:22 2012
    Cisco Identity Services Engine Patch
    Version      : 2
    Install Date : Wed Sep 12 13:10:36 2012
    Cisco Identity Services Engine Patch
    Version      : 3
    Install Date : Tue Nov 27 12:33:19 2012
    Cisco Identity Services Engine Patch
    Version      : 4
    Install Date : Tue Nov 27 12:52:50 2012
    ISEcdemo/admin# patch install ise-patchbundle-1.1.1.268-5-68046.i386.tar.gz my2
    Save the current ADE-OS running configuration? (yes/no) [yes] ? yes
    Generating configuration...
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