Two boots for OS? (Something about kernel)

I have the latest generation Mac Pro with customized built, 1x 3.33gHz 6-core and 8 Gig of RAM.
Here's something strange happened to me lately... about two weeks ago, the OS X will not load during the first boot. I have mine set at verbose mode so I can see the messages and usually from a cold boot, it will mention something like kernelcache is out of date and the kernal loading is now stopped. It will automatically reboot and then everything went fine as the OS loads up fairly quickly.
Does anyone has any idea on this? I have resetted the SMB/EFI by power cycle but still doing the same.
Thanks guys!
It's not a problem, just annoying
Oh BTW here are the Kernel console logs:
Failed boot:
Sep 13 08:30:31 localhost kernel[0]: PMAP: PCID enabled
Sep 13 08:30:31 localhost kernel[0]: Darwin Kernel Version 11.1.0: Tue Jul 26 16:07:11 PDT 2011; root:xnu-1699.22.81~1/RELEASE_X86_64
Sep 13 08:30:31 localhost kernel[0]: vm_page_bootstrap: 2023015 free pages and 57753 wired pages
Sep 13 08:30:31 localhost kernel[0]: kext submap [0xffffff7f8072e000 - 0xffffff8000000000], kernel text [0xffffff8000200000 - 0xffffff800072e000]
Sep 13 08:30:31 localhost kernel[0]: zone leak detection enabled
Sep 13 08:30:31 localhost kernel[0]: standard timeslicing quantum is 10000 us
Sep 13 08:30:31 localhost kernel[0]: mig_table_max_displ = 72
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=0 LocalApicId=0 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=1 LocalApicId=2 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=2 LocalApicId=4 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=3 LocalApicId=16 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=4 LocalApicId=18 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=5 LocalApicId=20 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=6 LocalApicId=1 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=7 LocalApicId=3 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=8 LocalApicId=5 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=9 LocalApicId=17 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=10 LocalApicId=19 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=11 LocalApicId=21 Enabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=12 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=13 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=14 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=15 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=16 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=17 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=18 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=19 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=20 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=21 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=22 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: AppleACPICPU: ProcessorId=23 LocalApicId=0 Disabled
Sep 13 08:30:31 localhost kernel[0]: calling mpo_policy_init for TMSafetyNet
Sep 13 08:30:31 localhost kernel[0]: Security policy loaded: Safety net for Time Machine (TMSafetyNet)
Sep 13 08:30:31 localhost kernel[0]: calling mpo_policy_init for Sandbox
Sep 13 08:30:31 localhost kernel[0]: Security policy loaded: Seatbelt sandbox policy (Sandbox)
Sep 13 08:30:31 localhost kernel[0]: calling mpo_policy_init for Quarantine
Sep 13 08:30:31 localhost kernel[0]: Security policy loaded: Quarantine policy (Quarantine)
Sep 13 08:30:31 localhost kernel[0]: Copyright (c) 1982, 1986, 1989, 1991, 1993
Sep 13 08:30:31 localhost kernel[0]: The Regents of the University of California. All rights reserved.
Sep 13 08:30:31 localhost kernel[0]: MAC Framework successfully initialized
Sep 13 08:30:31 localhost kernel[0]: using 16384 buffer headers and 10240 cluster IO buffer headers
Sep 13 08:30:31 localhost kernel[0]: IOAPIC: Version 0x20 Vectors 64:87
Sep 13 08:30:31 localhost kernel[0]: ACPI: System State [S0 S3 S4 S5] (S3)
Sep 13 08:30:31 localhost kernel[0]: PFM64 0xf10000000, 0xf0000000
Sep 13 08:30:31 localhost kernel[0]: [ PCI configuration begin ]
Sep 13 08:30:31 localhost kernel[0]: AppleIntelCPUPowerManagement: Turbo Ratios 111122
Sep 13 08:30:31 localhost kernel[0]: AppleIntelCPUPowerManagement: (built 13:08:12 Jun 18 2011) initialization complete
Sep 13 08:30:31 localhost kernel[0]: console relocated to 0xf10010000
Sep 13 08:30:31 localhost kernel[0]: PCI configuration changed (bridge=7 device=2 cardbus=0)
Sep 13 08:30:31 localhost kernel[0]: [ PCI configuration end, bridges 15 devices 51 ]
Sep 13 08:30:31 localhost kernel[0]: ETH0 cannot assert wake from D3cold
Sep 13 08:30:31 localhost kernel[0]: ETH1 cannot assert wake from D3cold
Sep 13 08:30:31 localhost kernel[0]: mbinit: done [96 MB total pool size, (64/32) split]
Sep 13 08:30:31 localhost kernel[0]: Pthread support ABORTS when sync kernel primitives misused
Sep 13 08:30:31 localhost kernel[0]: com.apple.AppleFSCompressionTypeZlib kmod start
Sep 13 08:30:31 localhost kernel[0]: com.apple.AppleFSCompressionTypeDataless kmod start
Sep 13 08:30:31 localhost kernel[0]: 2.4.0 Little Snitch: starting
Sep 13 08:30:31 localhost kernel[0]: com.apple.AppleFSCompressionTypeZlib load succeeded
Sep 13 08:30:31 localhost kernel[0]: com.apple.AppleFSCompressionTypeDataless load succeeded
Sep 13 08:30:31 localhost kernel[0]: AppleIntelCPUPowerManagementClient: ready
Sep 13 08:30:31 localhost kernel[0]: Intel82574L::start - Built Jun 18 2011 13:06:29 -- running on device at b9 d0 f0
Sep 13 08:30:31 localhost kernel[0]: Intel82574L::start - Built Jun 18 2011 13:06:29 -- running on device at b10 d0 f0
Sep 13 08:30:31 localhost kernel[0]: BTCOEXIST off
Sep 13 08:30:31 localhost kernel[0]: wl0: Broadcom BCM432b 802.11 Wireless Controller
Sep 13 08:30:31 localhost kernel[0]: 5.100.98.75
Sep 13 08:30:31 localhost kernel[0]: FireWire (OHCI) TI ID 823f built-in now active, GUID 70cd60fffe4d5cd6; max speed s800.
Sep 13 08:30:31 localhost kernel[0]: No interval found for . Using 8000000
Sep 13 08:30:33: --- last message repeated 19 times ---
Sep 13 08:30:31 localhost kernel[0]: [IOBluetoothHCIController::setConfigState] calling registerService
Sep 13 08:30:31 localhost kernel[0]: rooting via boot-uuid from /chosen: 211367EC-E655-3F5F-99DE-1C6A6600BE38
Sep 13 08:30:31 localhost kernel[0]: Waiting on <dict ID="0"><key>IOProviderClass</key><string ID="1">IOResources</string><key>IOResourceMatch</key><string ID="2">boot-uuid-media</string></dict>
Sep 13 08:30:31 localhost kernel[0]: Got boot device = IOService:/AppleACPIPlatformExpert/PCI0@0/AppleACPIPCI/SATA@1F,2/AppleAHCI/PRT3 @3/IOAHCIDevice@0/AppleAHCIDiskDriver/IOAHCIBlockStorageDevice/IOBlockStorageDri ver/OCZ-VERTEX2 Media/IOGUIDPartitionScheme/Raid Partition 2@2/AppleRAIDMember/AppleRAIDStripeSet/System@0
Sep 13 08:30:31 localhost kernel[0]: BSD root: disk3, major 14, minor 11
Sep 13 08:30:31 localhost kernel[0]: Kernel is LP64
Sep 13 08:30:32 localhost kernel[0]: jnl: error 45 from DKIOCUNMAP (extents=ffffff8014b30000, count=21); disabling trim for unknown-dev
Sep 13 08:30:32 localhost kernel[0]: Intel82574L: Ethernet address e8:06:88:d0:09:fd
Sep 13 08:30:32 localhost kernel[0]: Intel82574L: Ethernet address e8:06:88:cf:ec:44
Sep 13 08:30:32 localhost kernel[0]: AirPort_Brcm4331: Ethernet address c8:bc:c8:f4:0e:7d
Sep 13 08:30:32 localhost kernel[0]: IO80211Controller::dataLinkLayerAttachComplete(): adding AppleEFINVRAM notification
Sep 13 08:30:33 localhost kernel[0]: Created virtif 0xffffff8014afd800 p2p0
Sep 13 08:30:33 localhost kernel[0]: AirPort: Link Down on en2. Reason 8 (Disassociated because station leaving).
Sep 13 08:30:35 Steves-Mac-Pro kernel[0]: Previous Shutdown Cause: 5
Sep 13 08:30:35 Steves-Mac-Pro kernel[0]: DSMOS has arrived
Sep 13 08:30:35 Steves-Mac-Pro kernel[0]: ** Device in slot: SLOT-1 **
Sep 13 08:30:35 Steves-Mac-Pro kernel[0]: AppleTyMCEDriver::start coreVIDPID = 0xffffffff Number of packages = 1 Number of cpus = 12 memory monitor trough MCA
Sep 13 08:30:36 Steves-Mac-Pro kernel[0]: Ethernet [Intel82574L]: Link up on en1, 1-Gigabit, Full-duplex, Symmetric flow-control, Debug [796d,af48,0de1,0200,cde1,3c00]
Sep 13 08:30:39 Steves-Mac-Pro kernel[0]: 00000000 00000000 Intel82574L::timeoutHandler - has to reset the chipset once since there is still no link for the workaround

There are a couple hundred kernel extensions. Loading them individually takes too long. So they are put together into a kernel cache and loaded "all at once".
If the timestamp on the kernel cache disagrees with the timestamp on the directory that holds the individual extensions, something has changed -- start over.
If you boot into Safe Mode, this will do one pass of Disk Repair and also cause the loading of a minimal set of extensions. The next time you boot, the kernel cache will be rebuilt properly, and you should live happily ever after... maybe.
If you are booting 10.7 off a RAID Array not created under 10.7, you may continue to be in for a wild ride. Anomalies with installing onto and booting off a RAID Array are all over the early reviews of 10.7.
Consider going back to 10.6, or creating a "normal" boot drive with only System, Applications, Library, and the Hidden Unix files including paging/swap. Move all User files off to another drive except the original Admin user, and use that one only for Administration.

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