Problems converting using isquint

I am trying to convert a short sequence made in FCX ( exported to quicktime 7.0.3 ) to put onto a 5th generation ipod using isquint, but I get this message - Unsupported codec (id=0) for input stream #0.0
Has anyone ever had this problem, and if so what to do??
Thanks alot.

I understood that I had to export it to Quicktime first in order to then convert correctly for an ipod.
"Export to QT Movie" is a dedicated preset that creates a DV compressed reference (or self-contained) file suitable for handing off to other applications for further processing (e.g., creating a DVD). Compressor could be used for other specific purposes (like creating various streaming files) but "Export using QT Conversion" is probably best here. It gives you direct access to the "Movie to iPod (320 x 240)" high quality, multi-pass H.264/AAC preset for creating iTunes/iPod compatible files. This is a very slow conversion, so many people prefer the "Movie to MPEG-4" collection of presets which allow a moderately knowledgeable user create iPod compatible custom files in either MPEG-4 or H.264 single/multiple pass modes. Again, it is necessary to have some knowledge regarding video/audio data rates, profiles, size/aspect ratio, frame rates/changes thereto, keyframe use, and streaming settings if creating "multipurpose" files.
How do I do it directly from FCX?
That depends on which codec/mode you want to use. Are you, for instance, more interested in conversion speed, quality, or file size?

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