Some UIMessages not received while C# GUI is open

I have a sequence file that has a front end GUI written in C#. When the MainSequence is run, there is a sequence call step to show the C# GUI using a new thread. The GUI is used to select which other sequences to run in the sequence file as well as display percent complete status, etc.
The GUI form registers the ApplicationMgr.UIMessageEvent handler to respond to updates from sequence execution. I passed a reference of the ApplicationMgr using RunState.Engine.GetInternalOption(InternalOption_ApplicationManager) to the form.
If an error occurs in the sequence, the error dialog box does not display until after I close the form. It seems like for whatever reason, the form doesn't receive UIMessages (ie. UIMessageCodes.UIMsg_BreakOnRunTimeError) from the Engine itself (however it does work for custom UIMessages, ex the GUI updates when the sequence is execute properly).
I guess I don't have a full understanding of how UIMessages work and how it works with another thread.

I don't think I am cancelling the further processing of UIMessages (I am specifically looking for UIMessageCodes.UIMsg_BreakOnRunTimeError as well as my custom ones). The main UI (in this case TestStand itself) does eventually get to handle it when I close the GUI form.
I basically made a custom operator interface (but not a stand alone .exe operator interface like in the TS example folder) to allow the user to pick and choose which sequences they would like to run from the sequence file.
The custom operator interface is a C# form and is compiled into a DLL which is then executed by a .NET adapter step which executes the ShowDialog() method.
The sequence file is structured as follows:
[MainSequence]
[GUI]
[Test1]
[Test2]
[Test3]
[TestN]
The MainSequence has the following steps:
- Create notifier for GUI
- Run [GUI] in a new thread
- Init UUT / Query UUT status
- Wait for notifier from GUI to execute selected sequences
- Execute sequences that was chosen by the GUI
Let me know if there's any more detail I need to provide.
-Mike

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